G738832


Basic Information

Item Value
gene id G738832
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 67924607 ~ 67983064 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU838959
aacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaatttgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttgaggtatgtctctatcagttttgcacatcgagacactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtccggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggtttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU838959 True 468 lncRNA 0.40 2 67924607 67983064

Neighbor

gene id symbol gene type direction distance location
LOC110530413 NA coding upstream 180 67904516 ~ 67924427 (+)
LOC110530969 LOC106569181 coding upstream 155121 67759384 ~ 67769486 (+)
LOC110530410 LOC106569184 coding upstream 197665 67693817 ~ 67726942 (+)
LOC110530407 LOC106569186 coding upstream 230965 67577845 ~ 67693642 (+)
LOC110530403 LOC106569190 coding upstream 450305 67430853 ~ 67474302 (+)
LOC110530418 LOC106569175 coding downstream 202843 68185907 ~ 68198975 (+)
LOC118965633 NA coding downstream 492339 68475403 ~ 68506363 (+)
LOC110530424 LOC106569169 coding downstream 890373 68873437 ~ 68898424 (+)
LOC110529135 NA coding downstream 1022182 69005246 ~ 69006608 (+)
LOC110530427 LOC106569165 coding downstream 1036136 69019200 ~ 69045596 (+)
G738798 NA non-coding upstream 41493 67882863 ~ 67883114 (+)
G738793 LOC100380853 non-coding upstream 51099 67873275 ~ 67873508 (+)
G738367 NA non-coding upstream 119839 67802322 ~ 67804768 (+)
G738344 LOC106569180 non-coding upstream 148967 67773448 ~ 67775640 (+)
G738262 NA non-coding upstream 347501 67576771 ~ 67577106 (+)
G738866 NA non-coding downstream 6974 67990038 ~ 67992670 (+)
G738972 NA non-coding downstream 180330 68163394 ~ 68167270 (+)
G739188 NA non-coding downstream 227247 68210311 ~ 68210548 (+)
G739190 NA non-coding downstream 228768 68211832 ~ 68212448 (+)
G739192 NA non-coding downstream 230600 68213664 ~ 68214103 (+)
G738244 NA other upstream 376998 67546129 ~ 67547609 (+)
G738020 NA other upstream 692694 67231182 ~ 67231913 (+)
G737783 NA other upstream 708978 67170467 ~ 67215629 (+)
G737234 gs02 other upstream 1122527 66798573 ~ 66802080 (+)
G739648 NA other downstream 875319 68858383 ~ 68858753 (+)
G739670 NA other downstream 920301 68903365 ~ 68906965 (+)
G739708 NA other downstream 1021273 69004337 ~ 69005116 (+)
G740827 ripk1 other downstream 1553336 69536400 ~ 69538276 (+)
G742095 NA other downstream 2643157 70626221 ~ 70626744 (+)

Expression


Co-expression Network