G739190


Basic Information

Item Value
gene id G739190
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 68211832 ~ 68212448 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU839365
attttcaggtcgctccagagatgttcgatcgggttcaagtctgggctctggctggaccactcaaggacattcagagacttgtcccaaaaccactcctgcgttgtcttagctgtgtgcttagggacgttgtcctgttggaaggtgaacattcgccccagtctgagtgctctggagcaggttttcatcaaggatctctctgtactttgctctgttcatctttgccttgatcctgactagtctcccagtccctgccactgaaaaacatccccacagcatgatgctgacaccaccatgcttcacagtagggatggtgccatgtttcctccaaacgtgatgcttagcattcaggccaaagagttcattcttAGTTTCATAAGActagataatcttgtttctcatggtctgagagtcctttgagtgccttttggcaaacaccaagtggactgtcatgtgcatttaactgaggagtagcttctgtctggctactctaccatgaaggcctggtggagtgctgcagagatgcttgtacttctggaactctggagctctgtcagagtgacttttttggtacccatccccttatctgtgtctcgacacaattctgtctcttacaaaac

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU839365 True 617 lncRNA 0.48 1 68211832 68212448

Neighbor

gene id symbol gene type direction distance location
LOC110530418 LOC106569175 coding upstream 12857 68185907 ~ 68198975 (+)
LOC110530413 NA coding upstream 287405 67904516 ~ 67924427 (+)
LOC110530969 LOC106569181 coding upstream 442346 67759384 ~ 67769486 (+)
LOC110530410 LOC106569184 coding upstream 484890 67693817 ~ 67726942 (+)
LOC110530407 LOC106569186 coding upstream 518190 67577845 ~ 67693642 (+)
LOC118965633 NA coding downstream 262955 68475403 ~ 68506363 (+)
LOC110530424 LOC106569169 coding downstream 660989 68873437 ~ 68898424 (+)
LOC110529135 NA coding downstream 792798 69005246 ~ 69006608 (+)
LOC110530427 LOC106569165 coding downstream 806752 69019200 ~ 69045596 (+)
LOC110530428 LOC106569166 coding downstream 833963 69046411 ~ 69116995 (+)
G739188 NA non-coding upstream 1284 68210311 ~ 68210548 (+)
G738972 NA non-coding upstream 44562 68163394 ~ 68167270 (+)
G738866 NA non-coding upstream 219162 67990038 ~ 67992670 (+)
G738832 NA non-coding upstream 228768 67924607 ~ 67983064 (+)
G738835 NA non-coding upstream 283686 67927510 ~ 67928146 (+)
G739192 NA non-coding downstream 1216 68213664 ~ 68214103 (+)
G739206 NA non-coding downstream 13531 68225979 ~ 68226203 (+)
G739210 NA non-coding downstream 14283 68226731 ~ 68226948 (+)
G739215 NA non-coding downstream 20385 68232833 ~ 68233044 (+)
G739218 NA non-coding downstream 22502 68234950 ~ 68235171 (+)
G738244 NA other upstream 664223 67546129 ~ 67547609 (+)
G738020 NA other upstream 979919 67231182 ~ 67231913 (+)
G737783 NA other upstream 996203 67170467 ~ 67215629 (+)
G737234 gs02 other upstream 1409752 66798573 ~ 66802080 (+)
G739648 NA other downstream 645935 68858383 ~ 68858753 (+)
G739670 NA other downstream 690917 68903365 ~ 68906965 (+)
G739708 NA other downstream 791889 69004337 ~ 69005116 (+)
G740827 ripk1 other downstream 1323952 69536400 ~ 69538276 (+)
G742095 NA other downstream 2413773 70626221 ~ 70626744 (+)

Expression


Co-expression Network