G739218


Basic Information

Item Value
gene id G739218
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 68234950 ~ 68235171 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU839393
TTCCCAGAGAGGTAGGGTGCCAACTGGCTGGCTCACTTGGGCTTGGGCCATCCTTCCCTCTGTAACGTCCTCTTGAAGGTGCACAAATACATCACCTGTTGTATGTTGGTGCATCTTCCTCCCTTAACTTAACCAGGAACTGATTCGGGCCAGGCTCCTGAGCCCTCCCAGCCTTCAACTGGGCTACCTCCGCTACCAGTCTGAGGTTATGTTGGTGCTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU839393 True 222 lncRNA 0.55 1 68234950 68235171

Neighbor

gene id symbol gene type direction distance location
LOC110530418 LOC106569175 coding upstream 35975 68185907 ~ 68198975 (+)
LOC110530413 NA coding upstream 310523 67904516 ~ 67924427 (+)
LOC110530969 LOC106569181 coding upstream 465464 67759384 ~ 67769486 (+)
LOC110530410 LOC106569184 coding upstream 508008 67693817 ~ 67726942 (+)
LOC110530407 LOC106569186 coding upstream 541308 67577845 ~ 67693642 (+)
LOC118965633 NA coding downstream 240232 68475403 ~ 68506363 (+)
LOC110530424 LOC106569169 coding downstream 638266 68873437 ~ 68898424 (+)
LOC110529135 NA coding downstream 770075 69005246 ~ 69006608 (+)
LOC110530427 LOC106569165 coding downstream 784029 69019200 ~ 69045596 (+)
LOC110530428 LOC106569166 coding downstream 811240 69046411 ~ 69116995 (+)
G739215 NA non-coding upstream 1906 68232833 ~ 68233044 (+)
G739210 NA non-coding upstream 8002 68226731 ~ 68226948 (+)
G739206 NA non-coding upstream 8747 68225979 ~ 68226203 (+)
G739192 NA non-coding upstream 20847 68213664 ~ 68214103 (+)
G739190 NA non-coding upstream 22502 68211832 ~ 68212448 (+)
G739225 NA non-coding downstream 4566 68239737 ~ 68239966 (+)
G739226 NA non-coding downstream 5311 68240482 ~ 68240791 (+)
G739266 NA non-coding downstream 38590 68273761 ~ 68274022 (+)
G739384 NA non-coding downstream 208019 68443190 ~ 68523646 (+)
G739622 NA non-coding downstream 580948 68816119 ~ 68816346 (+)
G738244 NA other upstream 687341 67546129 ~ 67547609 (+)
G738020 NA other upstream 1003037 67231182 ~ 67231913 (+)
G737783 NA other upstream 1019321 67170467 ~ 67215629 (+)
G737234 gs02 other upstream 1432870 66798573 ~ 66802080 (+)
G739648 NA other downstream 623212 68858383 ~ 68858753 (+)
G739670 NA other downstream 668194 68903365 ~ 68906965 (+)
G739708 NA other downstream 769166 69004337 ~ 69005116 (+)
G740827 ripk1 other downstream 1301229 69536400 ~ 69538276 (+)
G742095 NA other downstream 2391050 70626221 ~ 70626744 (+)

Expression


Co-expression Network