G739633


Basic Information

Item Value
gene id G739633
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 68828788 ~ 68829043 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU839839
atatcatacactgcagttgtgGGAAACATGGGAAAGTTATGCTCATTTGAAACAGGATAAACGTGTTATTCCATCTTGTAGACAAGTACCAGAAAATCACAATGAAAGTATTTCACACTTGCTCAAGAGCTCTTTTTTTTCTGtgcccattcagcattgttcacaccctcttaaggcTAAGGCTACCCATCTACTTAAGTAGTCATATGAGGCCATATGAGTGATttaaggtagtgtagtaaacaggtaGTGAAAg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU839839 True 256 lncRNA 0.38 1 68828788 68829043

Neighbor

gene id symbol gene type direction distance location
LOC118965633 NA coding upstream 322425 68475403 ~ 68506363 (+)
LOC110530418 LOC106569175 coding upstream 629813 68185907 ~ 68198975 (+)
LOC110530413 NA coding upstream 904361 67904516 ~ 67924427 (+)
LOC110530969 LOC106569181 coding upstream 1059302 67759384 ~ 67769486 (+)
LOC110530410 LOC106569184 coding upstream 1101846 67693817 ~ 67726942 (+)
LOC110530424 LOC106569169 coding downstream 44394 68873437 ~ 68898424 (+)
LOC110529135 NA coding downstream 176203 69005246 ~ 69006608 (+)
LOC110530427 LOC106569165 coding downstream 190157 69019200 ~ 69045596 (+)
LOC110530428 LOC106569166 coding downstream 217368 69046411 ~ 69116995 (+)
LOC110530431 igfbp-3b1 coding downstream 306528 69135571 ~ 69148676 (+)
G739624 NA non-coding upstream 11089 68817499 ~ 68817699 (+)
G739622 NA non-coding upstream 12442 68816119 ~ 68816346 (+)
G739384 NA non-coding upstream 305142 68443190 ~ 68523646 (+)
G739266 NA non-coding upstream 554766 68273761 ~ 68274022 (+)
G739226 NA non-coding upstream 587997 68240482 ~ 68240791 (+)
G739634 NA non-coding downstream 245 68829288 ~ 68829585 (+)
G739638 LOC106569170 non-coding downstream 15997 68845040 ~ 68856024 (+)
G739735 NA non-coding downstream 170129 68999172 ~ 68999388 (+)
G739736 NA non-coding downstream 171128 69000171 ~ 69000626 (+)
G739710 NA non-coding downstream 174474 69003517 ~ 69004130 (+)
G738244 NA other upstream 1281179 67546129 ~ 67547609 (+)
G738020 NA other upstream 1596875 67231182 ~ 67231913 (+)
G737783 NA other upstream 1613159 67170467 ~ 67215629 (+)
G737234 gs02 other upstream 2026708 66798573 ~ 66802080 (+)
G739648 NA other downstream 29340 68858383 ~ 68858753 (+)
G739670 NA other downstream 74322 68903365 ~ 68906965 (+)
G739708 NA other downstream 175294 69004337 ~ 69005116 (+)
G740827 ripk1 other downstream 707357 69536400 ~ 69538276 (+)
G742095 NA other downstream 1797178 70626221 ~ 70626744 (+)

Expression


Co-expression Network