Gene
RNA
| Item | Value |
|---|---|
| gene id | G739802 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 69145635 ~ 69147221 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU840025 | True | 312 | lncRNA | 0.43 | 2 | 69145635 | 69147221 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530428 | LOC106569166 | coding | upstream | 28640 | 69046411 ~ 69116995 (+) |
| LOC110530427 | LOC106569165 | coding | upstream | 100039 | 69019200 ~ 69045596 (+) |
| LOC110529135 | NA | coding | upstream | 139027 | 69005246 ~ 69006608 (+) |
| LOC110530424 | LOC106569169 | coding | upstream | 247211 | 68873437 ~ 68898424 (+) |
| LOC118965633 | NA | coding | upstream | 639272 | 68475403 ~ 68506363 (+) |
| LOC110530432 | LOC106569162 | coding | downstream | 116301 | 69263522 ~ 69354693 (+) |
| LOC110530434 | LOC106569160 | coding | downstream | 208629 | 69355850 ~ 69434566 (+) |
| opn7a | LOC106569157 | coding | downstream | 360434 | 69507655 ~ 69520370 (+) |
| dusp22b | LOC106569155 | coding | downstream | 415765 | 69562986 ~ 69576816 (+) |
| LOC100499175 | LOC106569154 | coding | downstream | 431773 | 69578994 ~ 69591039 (+) |
| G739748 | NA | non-coding | upstream | 26514 | 69117563 ~ 69119121 (+) |
| G739746 | NA | non-coding | upstream | 99763 | 69045602 ~ 69045872 (+) |
| G739710 | NA | non-coding | upstream | 141505 | 69003517 ~ 69004130 (+) |
| G739736 | NA | non-coding | upstream | 145009 | 69000171 ~ 69000626 (+) |
| G739735 | NA | non-coding | upstream | 146247 | 68999172 ~ 68999388 (+) |
| G739821 | LOC106569164 | non-coding | downstream | 34292 | 69181513 ~ 69192634 (+) |
| G739819 | NA | non-coding | downstream | 34895 | 69182116 ~ 69182446 (+) |
| G739932 | NA | non-coding | downstream | 227903 | 69375124 ~ 69375357 (+) |
| G739933 | NA | non-coding | downstream | 228330 | 69375551 ~ 69375818 (+) |
| G739934 | NA | non-coding | downstream | 228711 | 69375932 ~ 69376131 (+) |
| G739708 | NA | other | upstream | 140519 | 69004337 ~ 69005116 (+) |
| G739670 | NA | other | upstream | 238670 | 68903365 ~ 68906965 (+) |
| G739648 | NA | other | upstream | 286882 | 68858383 ~ 68858753 (+) |
| LOC110530413 | NA | other | upstream | 1223013 | 67904516 ~ 67924427 (+) |
| G738244 | NA | other | upstream | 1598026 | 67546129 ~ 67547609 (+) |
| G740827 | ripk1 | other | downstream | 389179 | 69536400 ~ 69538276 (+) |
| G742095 | NA | other | downstream | 1479000 | 70626221 ~ 70626744 (+) |
| G742860 | NA | other | downstream | 2548381 | 71695602 ~ 71715616 (+) |
| LOC110530976 | LOC106569323 | other | downstream | 3395505 | 72542055 ~ 72555556 (+) |
| LOC110530502 | LOC106569321 | other | downstream | 3487663 | 72634238 ~ 72714065 (+) |
