G739933


Basic Information

Item Value
gene id G739933
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 69375551 ~ 69375818 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU840164
ctgtggggacgatgttgtcgatgcacttattgatgaggcTGGTGACAGGTGGTATACTCCCCAATGCctttggatgaatcccggaacatattccagcctgtgctagcaaaatagccctgtagcatagcatccgtgtcatcttaccacttccatattgagcgagtcactgctttattttttgcttgtaagccggaatcaggaggatagaattatggtcagatttgccaaatggctttgtatgtgtctctgtgtgtgtagtaaaaGTGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU840164 True 268 lncRNA 0.46 1 69375551 69375818

Neighbor

gene id symbol gene type direction distance location
LOC110530432 LOC106569162 coding upstream 20858 69263522 ~ 69354693 (+)
LOC110530431 igfbp-3b1 coding upstream 226875 69135571 ~ 69148676 (+)
LOC110530428 LOC106569166 coding upstream 258556 69046411 ~ 69116995 (+)
LOC110530427 LOC106569165 coding upstream 329955 69019200 ~ 69045596 (+)
LOC110529135 NA coding upstream 368943 69005246 ~ 69006608 (+)
opn7a LOC106569157 coding downstream 131837 69507655 ~ 69520370 (+)
dusp22b LOC106569155 coding downstream 187168 69562986 ~ 69576816 (+)
LOC100499175 LOC106569154 coding downstream 203176 69578994 ~ 69591039 (+)
LOC110530440 foxq1 coding downstream 316471 69692289 ~ 69693962 (+)
foxf2a foxf2 coding downstream 323815 69699633 ~ 69703318 (+)
G739932 NA non-coding upstream 194 69375124 ~ 69375357 (+)
G739821 LOC106569164 non-coding upstream 182917 69181513 ~ 69192634 (+)
G739819 NA non-coding upstream 193105 69182116 ~ 69182446 (+)
G739802 NA non-coding upstream 228330 69145635 ~ 69147221 (+)
G739748 NA non-coding upstream 256430 69117563 ~ 69119121 (+)
G739934 NA non-coding downstream 114 69375932 ~ 69376131 (+)
G739940 NA non-coding downstream 16480 69392298 ~ 69392513 (+)
G739942 NA non-coding downstream 30474 69406292 ~ 69406530 (+)
G739957 NA non-coding downstream 67549 69443367 ~ 69475441 (+)
G739958 NA non-coding downstream 68745 69444563 ~ 69450291 (+)
G739708 NA other upstream 370435 69004337 ~ 69005116 (+)
G739670 NA other upstream 468586 68903365 ~ 68906965 (+)
G739648 NA other upstream 516798 68858383 ~ 68858753 (+)
LOC110530413 NA other upstream 1452929 67904516 ~ 67924427 (+)
G738244 NA other upstream 1827942 67546129 ~ 67547609 (+)
G740827 ripk1 other downstream 160582 69536400 ~ 69538276 (+)
G742095 NA other downstream 1250403 70626221 ~ 70626744 (+)
G742860 NA other downstream 2319784 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 3166908 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 3259066 72634238 ~ 72714065 (+)

Expression


Co-expression Network