Gene
RNA
| Item | Value |
|---|---|
| gene id | G739940 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 69392298 ~ 69392513 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU840171 | True | 216 | lncRNA | 0.41 | 1 | 69392298 | 69392513 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530432 | LOC106569162 | coding | upstream | 37605 | 69263522 ~ 69354693 (+) |
| LOC110530431 | igfbp-3b1 | coding | upstream | 243622 | 69135571 ~ 69148676 (+) |
| LOC110530428 | LOC106569166 | coding | upstream | 275303 | 69046411 ~ 69116995 (+) |
| LOC110530427 | LOC106569165 | coding | upstream | 346702 | 69019200 ~ 69045596 (+) |
| LOC110529135 | NA | coding | upstream | 385690 | 69005246 ~ 69006608 (+) |
| opn7a | LOC106569157 | coding | downstream | 115142 | 69507655 ~ 69520370 (+) |
| dusp22b | LOC106569155 | coding | downstream | 170473 | 69562986 ~ 69576816 (+) |
| LOC100499175 | LOC106569154 | coding | downstream | 186481 | 69578994 ~ 69591039 (+) |
| LOC110530440 | foxq1 | coding | downstream | 299776 | 69692289 ~ 69693962 (+) |
| foxf2a | foxf2 | coding | downstream | 307120 | 69699633 ~ 69703318 (+) |
| G739934 | NA | non-coding | upstream | 16167 | 69375932 ~ 69376131 (+) |
| G739933 | NA | non-coding | upstream | 16480 | 69375551 ~ 69375818 (+) |
| G739932 | NA | non-coding | upstream | 16941 | 69375124 ~ 69375357 (+) |
| G739821 | LOC106569164 | non-coding | upstream | 199664 | 69181513 ~ 69192634 (+) |
| G739819 | NA | non-coding | upstream | 209852 | 69182116 ~ 69182446 (+) |
| G739942 | NA | non-coding | downstream | 13779 | 69406292 ~ 69406530 (+) |
| G739957 | NA | non-coding | downstream | 50854 | 69443367 ~ 69475441 (+) |
| G739958 | NA | non-coding | downstream | 52050 | 69444563 ~ 69450291 (+) |
| G740779 | NA | non-coding | downstream | 106457 | 69498970 ~ 69499192 (+) |
| G740783 | NA | non-coding | downstream | 109602 | 69502115 ~ 69502330 (+) |
| G739708 | NA | other | upstream | 387182 | 69004337 ~ 69005116 (+) |
| G739670 | NA | other | upstream | 485333 | 68903365 ~ 68906965 (+) |
| G739648 | NA | other | upstream | 533545 | 68858383 ~ 68858753 (+) |
| LOC110530413 | NA | other | upstream | 1469676 | 67904516 ~ 67924427 (+) |
| G738244 | NA | other | upstream | 1844689 | 67546129 ~ 67547609 (+) |
| G740827 | ripk1 | other | downstream | 143887 | 69536400 ~ 69538276 (+) |
| G742095 | NA | other | downstream | 1233708 | 70626221 ~ 70626744 (+) |
| G742860 | NA | other | downstream | 2303089 | 71695602 ~ 71715616 (+) |
| LOC110530976 | LOC106569323 | other | downstream | 3150213 | 72542055 ~ 72555556 (+) |
| LOC110530502 | LOC106569321 | other | downstream | 3242371 | 72634238 ~ 72714065 (+) |
