Gene
RNA
| Item | Value |
|---|---|
| gene id | G739942 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 69406292 ~ 69406530 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU840173 | True | 239 | lncRNA | 0.50 | 1 | 69406292 | 69406530 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530432 | LOC106569162 | coding | upstream | 51599 | 69263522 ~ 69354693 (+) |
| LOC110530431 | igfbp-3b1 | coding | upstream | 257616 | 69135571 ~ 69148676 (+) |
| LOC110530428 | LOC106569166 | coding | upstream | 289297 | 69046411 ~ 69116995 (+) |
| LOC110530427 | LOC106569165 | coding | upstream | 360696 | 69019200 ~ 69045596 (+) |
| LOC110529135 | NA | coding | upstream | 399684 | 69005246 ~ 69006608 (+) |
| opn7a | LOC106569157 | coding | downstream | 101125 | 69507655 ~ 69520370 (+) |
| dusp22b | LOC106569155 | coding | downstream | 156456 | 69562986 ~ 69576816 (+) |
| LOC100499175 | LOC106569154 | coding | downstream | 172464 | 69578994 ~ 69591039 (+) |
| LOC110530440 | foxq1 | coding | downstream | 285759 | 69692289 ~ 69693962 (+) |
| foxf2a | foxf2 | coding | downstream | 293103 | 69699633 ~ 69703318 (+) |
| G739940 | NA | non-coding | upstream | 13779 | 69392298 ~ 69392513 (+) |
| G739934 | NA | non-coding | upstream | 30161 | 69375932 ~ 69376131 (+) |
| G739933 | NA | non-coding | upstream | 30474 | 69375551 ~ 69375818 (+) |
| G739932 | NA | non-coding | upstream | 30935 | 69375124 ~ 69375357 (+) |
| G739821 | LOC106569164 | non-coding | upstream | 213658 | 69181513 ~ 69192634 (+) |
| G739957 | NA | non-coding | downstream | 36837 | 69443367 ~ 69475441 (+) |
| G739958 | NA | non-coding | downstream | 38033 | 69444563 ~ 69450291 (+) |
| G740779 | NA | non-coding | downstream | 92440 | 69498970 ~ 69499192 (+) |
| G740783 | NA | non-coding | downstream | 95585 | 69502115 ~ 69502330 (+) |
| G740789 | NA | non-coding | downstream | 98727 | 69505257 ~ 69505543 (+) |
| G739708 | NA | other | upstream | 401176 | 69004337 ~ 69005116 (+) |
| G739670 | NA | other | upstream | 499327 | 68903365 ~ 68906965 (+) |
| G739648 | NA | other | upstream | 547539 | 68858383 ~ 68858753 (+) |
| LOC110530413 | NA | other | upstream | 1483670 | 67904516 ~ 67924427 (+) |
| G738244 | NA | other | upstream | 1858683 | 67546129 ~ 67547609 (+) |
| G740827 | ripk1 | other | downstream | 129870 | 69536400 ~ 69538276 (+) |
| G742095 | NA | other | downstream | 1219691 | 70626221 ~ 70626744 (+) |
| G742860 | NA | other | downstream | 2289072 | 71695602 ~ 71715616 (+) |
| LOC110530976 | LOC106569323 | other | downstream | 3136196 | 72542055 ~ 72555556 (+) |
| LOC110530502 | LOC106569321 | other | downstream | 3228354 | 72634238 ~ 72714065 (+) |
