G739958


Basic Information

Item Value
gene id G739958
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 69444563 ~ 69450291 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU840189
GTCCGACCGTGACTGCTCATGCCAGAAACCCAGTGCATGGAGGAATTCGTGTTCGATGGTCGCAATGCGGTCACAATTGGTCCCGATGGACAACCTCTGTTTCCCCACATGTTGGTTACCCACAGATGAGAAACAACCGCTTCCTTTGAAAATGGAAATGTAGTTCTGCTCTCCCTCCCAGGGGTTGAAGTCGATACAGGTCTTCAGGCGATACTGTTCAAAGGCCTTCAGGATAACACCTTTTGCATTGATCTCCAAGTCATCCTCAAAGTAGTAGGGAACAGTCTTTGGCCATCTGTATTGATCCCCTATTATAGAATTCCGGCCTTGTTTCTCATCAAGCTCAATATCCCCCTCCACCAGGTTTAACCCAGCCTCTTCATTGATATCAAAGATGTCCATGTCCCTTCCACCATCCACATCATATTCTAAAACTCTTGGTGTAGGCAGAGATAAGACATTTTCACATAAGATCCATGAAATATGGAGGATGACTAAATATGTAG

Function

NR:

description
meprin A subunit beta-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU840189 True 506 lncRNA 0.45 7 69444563 69450291

Neighbor

gene id symbol gene type direction distance location
LOC110530434 LOC106569160 coding upstream 9997 69355850 ~ 69434566 (+)
LOC110530432 LOC106569162 coding upstream 89870 69263522 ~ 69354693 (+)
LOC110530431 igfbp-3b1 coding upstream 295887 69135571 ~ 69148676 (+)
LOC110530428 LOC106569166 coding upstream 327568 69046411 ~ 69116995 (+)
LOC110530427 LOC106569165 coding upstream 398967 69019200 ~ 69045596 (+)
opn7a LOC106569157 coding downstream 57364 69507655 ~ 69520370 (+)
dusp22b LOC106569155 coding downstream 112695 69562986 ~ 69576816 (+)
LOC100499175 LOC106569154 coding downstream 128703 69578994 ~ 69591039 (+)
LOC110530440 foxq1 coding downstream 241998 69692289 ~ 69693962 (+)
foxf2a foxf2 coding downstream 249342 69699633 ~ 69703318 (+)
G739942 NA non-coding upstream 38033 69406292 ~ 69406530 (+)
G739940 NA non-coding upstream 52050 69392298 ~ 69392513 (+)
G739934 NA non-coding upstream 68432 69375932 ~ 69376131 (+)
G739933 NA non-coding upstream 68745 69375551 ~ 69375818 (+)
G739932 NA non-coding upstream 69206 69375124 ~ 69375357 (+)
G740779 NA non-coding downstream 48679 69498970 ~ 69499192 (+)
G740783 NA non-coding downstream 51824 69502115 ~ 69502330 (+)
G740789 NA non-coding downstream 54966 69505257 ~ 69505543 (+)
G740790 NA non-coding downstream 55458 69505749 ~ 69505962 (+)
G740839 ripk1 non-coding downstream 101161 69551452 ~ 69553671 (+)
G739708 NA other upstream 439447 69004337 ~ 69005116 (+)
G739670 NA other upstream 537598 68903365 ~ 68906965 (+)
G739648 NA other upstream 585810 68858383 ~ 68858753 (+)
LOC110530413 NA other upstream 1521941 67904516 ~ 67924427 (+)
G738244 NA other upstream 1896954 67546129 ~ 67547609 (+)
G740827 ripk1 other downstream 86109 69536400 ~ 69538276 (+)
G742095 NA other downstream 1175930 70626221 ~ 70626744 (+)
G742860 NA other downstream 2245311 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 3092435 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 3184593 72634238 ~ 72714065 (+)

Expression


Co-expression Network