Gene
RNA
| Item | Value |
|---|---|
| gene id | G741071 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 69720489 ~ 69720841 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU841391 | True | 353 | lncRNA | 0.44 | 1 | 69720489 | 69720841 |
69,718,800
69,719,200
69,719,600
69,720,000
69,720,400
69,720,800
69,721,200
69,721,600
69,722,000
69,722,400
69,722,800
69,723,200
69,723,600
NC_048572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530438 | ripk1 | coding | downstream | 166799 | 69537168 ~ 69553690 (-) |
| LOC110530436 | rnf138 | coding | downstream | 233355 | 69477306 ~ 69487134 (-) |
| LOC118965618 | rnf138 | coding | downstream | 246100 | 69461920 ~ 69474389 (-) |
| si:ch73-40a17.3 | mep1b | coding | downstream | 270066 | 69434542 ~ 69450423 (-) |
| LOC110530970 | LOC106569164 | coding | downstream | 487495 | 69114482 ~ 69240965 (-) |
| LOC110530443 | LOC106569150 | coding | upstream | 335662 | 70056503 ~ 70095135 (-) |
| LOC110530971 | NA | coding | upstream | 428007 | 70148848 ~ 70160838 (-) |
| LOC110530448 | NA | coding | upstream | 443173 | 70164014 ~ 70173178 (-) |
| gpaa1 | gpaa1 | coding | upstream | 465628 | 70186469 ~ 70198565 (-) |
| LOC110530449 | NA | coding | upstream | 478046 | 70198887 ~ 70200278 (-) |
| G741021 | NA | non-coding | downstream | 59367 | 69651841 ~ 69661122 (-) |
| G740963 | NA | non-coding | downstream | 162509 | 69557751 ~ 69557980 (-) |
| G740817 | NA | non-coding | downstream | 196028 | 69524225 ~ 69524461 (-) |
| G740816 | NA | non-coding | downstream | 196802 | 69523389 ~ 69523687 (-) |
| G740681 | LOC106599727 | non-coding | downstream | 289005 | 69431270 ~ 69431484 (-) |
| G741178 | NA | non-coding | upstream | 63611 | 69784452 ~ 69785235 (-) |
| G741195 | LOC100136012 | non-coding | upstream | 90940 | 69811781 ~ 69812052 (-) |
| G741211 | NA | non-coding | upstream | 123917 | 69844758 ~ 69845031 (-) |
| G741212 | NA | non-coding | upstream | 124743 | 69845584 ~ 69845813 (-) |
| G741365 | NA | non-coding | upstream | 276823 | 69997664 ~ 69997928 (-) |
| G740718 | LOC106569160 | other | downstream | 289836 | 69408968 ~ 69430653 (-) |
| igfbp1 | igfbp1 | other | downstream | 562763 | 69150343 ~ 69157726 (-) |
| G738504 | LOC106569192 | other | downstream | 2295150 | 67423863 ~ 67425339 (-) |
| G738502 | LOC106569192 | other | downstream | 2299433 | 67420739 ~ 67421056 (-) |
| G738472 | LOC106569192 | other | downstream | 2338512 | 67381220 ~ 67381977 (-) |
| G741077 | foxc1 | other | upstream | 4933 | 69725774 ~ 69727431 (-) |
| G741177 | NA | other | upstream | 61448 | 69782289 ~ 69783294 (-) |
| G742038 | NA | other | upstream | 798546 | 70519387 ~ 70525951 (-) |
