G741109


Basic Information

Item Value
gene id G741109
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 69764083 ~ 69764429 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU841436
ATTCTAGCCCGGTGctctctattccagctcctcacattggccgggctagaatgggcatccagcctggaaggagggtgccggctcagcgctcctggtctccagtgtacctccttggaccaggatgtcctgcgccggctctgcatACTGTGTCTCCGAtgagtctgcacagcccagtgcgtcctgtgccagcgccctgcCCATTTGCAGGGCGAAaataaacatccagccaggacgggttgtgtcagctctacactccagacctccagtgcgcctccacagtccagtacgtcctgtgcctgctccccgcactcgtcctgaggtgcgtgtcaccagcccagtaccaccag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106595571

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU841436 True 347 lncRNA 0.61 1 69764083 69764429

Neighbor

gene id symbol gene type direction distance location
LOC110530442 foxc1 coding upstream 36609 69725327 ~ 69727474 (+)
foxf2a foxf2 coding upstream 60765 69699633 ~ 69703318 (+)
LOC110530440 foxq1 coding upstream 70121 69692289 ~ 69693962 (+)
LOC100499175 LOC106569154 coding upstream 173044 69578994 ~ 69591039 (+)
dusp22b LOC106569155 coding upstream 187267 69562986 ~ 69576816 (+)
wrnip1 wrnip1 coding downstream 338736 70103165 ~ 70127450 (+)
dhx30 dhx30 coding downstream 371026 70135455 ~ 70148930 (+)
LOC110530450 LOC106569144 coding downstream 408002 70172431 ~ 70186472 (+)
LOC110530454 LOC106569140 coding downstream 686578 70451007 ~ 70460534 (+)
LOC110530455 LOC106569138 coding downstream 699419 70463848 ~ 70493098 (+)
G741104 NA non-coding upstream 18489 69745090 ~ 69745594 (+)
G741094 NA non-coding upstream 24749 69739123 ~ 69739334 (+)
G740840 NA non-coding upstream 210052 69553785 ~ 69554031 (+)
G740839 ripk1 non-coding upstream 210412 69551452 ~ 69553671 (+)
G740790 NA non-coding upstream 258121 69505749 ~ 69505962 (+)
G741118 NA non-coding downstream 10558 69774987 ~ 69775199 (+)
G741119 NA non-coding downstream 10853 69775282 ~ 69775497 (+)
G741120 NA non-coding downstream 11511 69775940 ~ 69776231 (+)
G741126 NA non-coding downstream 19647 69784076 ~ 69784360 (+)
G741129 NA non-coding downstream 22223 69786652 ~ 69787085 (+)
G740827 ripk1 other upstream 225807 69536400 ~ 69538276 (+)
G739708 NA other upstream 758967 69004337 ~ 69005116 (+)
G739670 NA other upstream 857118 68903365 ~ 68906965 (+)
G739648 NA other upstream 905330 68858383 ~ 68858753 (+)
LOC110530413 NA other upstream 1841461 67904516 ~ 67924427 (+)
G742095 NA other downstream 861792 70626221 ~ 70626744 (+)
G742860 NA other downstream 1931173 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 2778297 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 2870455 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 3095979 72779485 ~ 72872336 (+)

Expression


Co-expression Network