G741143


Basic Information

Item Value
gene id G741143
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 69811417 ~ 69811633 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU841470
atgacataagtatttgatcacctaccaaccagtaagaattccggctctcacagacctgttagtttttctttaaggaGCCATCCTGTTcttcactcattacctgtattaactgcacctgtttgaactcgttacctgtataaaagacacctgtccacacactcagtcaaacagactccaacctctccacaatggccaagaccagagggctgtgtaagga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU841470 True 217 lncRNA 0.44 1 69811417 69811633

Neighbor

gene id symbol gene type direction distance location
LOC110530442 foxc1 coding upstream 83943 69725327 ~ 69727474 (+)
foxf2a foxf2 coding upstream 108099 69699633 ~ 69703318 (+)
LOC110530440 foxq1 coding upstream 117455 69692289 ~ 69693962 (+)
LOC100499175 LOC106569154 coding upstream 220378 69578994 ~ 69591039 (+)
dusp22b LOC106569155 coding upstream 234601 69562986 ~ 69576816 (+)
wrnip1 wrnip1 coding downstream 291532 70103165 ~ 70127450 (+)
dhx30 dhx30 coding downstream 323822 70135455 ~ 70148930 (+)
LOC110530450 LOC106569144 coding downstream 360798 70172431 ~ 70186472 (+)
LOC110530454 LOC106569140 coding downstream 639374 70451007 ~ 70460534 (+)
LOC110530455 LOC106569138 coding downstream 652215 70463848 ~ 70493098 (+)
G741129 NA non-coding upstream 24332 69786652 ~ 69787085 (+)
G741126 NA non-coding upstream 27057 69784076 ~ 69784360 (+)
G741120 NA non-coding upstream 35186 69775940 ~ 69776231 (+)
G741119 NA non-coding upstream 35920 69775282 ~ 69775497 (+)
G741118 NA non-coding upstream 36218 69774987 ~ 69775199 (+)
G741148 NA non-coding downstream 10274 69821907 ~ 69822171 (+)
G741161 NA non-coding downstream 33748 69845381 ~ 69845597 (+)
G741162 NA non-coding downstream 35540 69847173 ~ 69847434 (+)
G741369 NA non-coding downstream 189233 70000866 ~ 70001197 (+)
G741417 NA non-coding downstream 236508 70048141 ~ 70048368 (+)
G740827 ripk1 other upstream 273141 69536400 ~ 69538276 (+)
G739708 NA other upstream 806301 69004337 ~ 69005116 (+)
G739670 NA other upstream 904452 68903365 ~ 68906965 (+)
G739648 NA other upstream 952664 68858383 ~ 68858753 (+)
LOC110530413 NA other upstream 1888795 67904516 ~ 67924427 (+)
G742095 NA other downstream 814588 70626221 ~ 70626744 (+)
G742860 NA other downstream 1883969 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 2731093 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 2823251 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 3048775 72779485 ~ 72872336 (+)

Expression


Co-expression Network