G741148


Basic Information

Item Value
gene id G741148
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 69821907 ~ 69822171 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU841475
tttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttgagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU841475 True 265 lncRNA 0.34 1 69821907 69822171

Neighbor

gene id symbol gene type direction distance location
LOC110530442 foxc1 coding upstream 94433 69725327 ~ 69727474 (+)
foxf2a foxf2 coding upstream 118589 69699633 ~ 69703318 (+)
LOC110530440 foxq1 coding upstream 127945 69692289 ~ 69693962 (+)
LOC100499175 LOC106569154 coding upstream 230868 69578994 ~ 69591039 (+)
dusp22b LOC106569155 coding upstream 245091 69562986 ~ 69576816 (+)
wrnip1 wrnip1 coding downstream 280994 70103165 ~ 70127450 (+)
dhx30 dhx30 coding downstream 313284 70135455 ~ 70148930 (+)
LOC110530450 LOC106569144 coding downstream 350260 70172431 ~ 70186472 (+)
LOC110530454 LOC106569140 coding downstream 628836 70451007 ~ 70460534 (+)
LOC110530455 LOC106569138 coding downstream 641677 70463848 ~ 70493098 (+)
G741143 NA non-coding upstream 10274 69811417 ~ 69811633 (+)
G741129 NA non-coding upstream 34822 69786652 ~ 69787085 (+)
G741126 NA non-coding upstream 37547 69784076 ~ 69784360 (+)
G741120 NA non-coding upstream 45676 69775940 ~ 69776231 (+)
G741119 NA non-coding upstream 46410 69775282 ~ 69775497 (+)
G741161 NA non-coding downstream 23210 69845381 ~ 69845597 (+)
G741162 NA non-coding downstream 25002 69847173 ~ 69847434 (+)
G741369 NA non-coding downstream 178695 70000866 ~ 70001197 (+)
G741417 NA non-coding downstream 225970 70048141 ~ 70048368 (+)
G741425 NA non-coding downstream 233765 70055936 ~ 70062360 (+)
G740827 ripk1 other upstream 283631 69536400 ~ 69538276 (+)
G739708 NA other upstream 816791 69004337 ~ 69005116 (+)
G739670 NA other upstream 914942 68903365 ~ 68906965 (+)
G739648 NA other upstream 963154 68858383 ~ 68858753 (+)
LOC110530413 NA other upstream 1899285 67904516 ~ 67924427 (+)
G742095 NA other downstream 804050 70626221 ~ 70626744 (+)
G742860 NA other downstream 1873431 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 2720555 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 2812713 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 3038237 72779485 ~ 72872336 (+)

Expression


Co-expression Network