G741417


Basic Information

Item Value
gene id G741417
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 70048141 ~ 70048368 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU841748
actgcccacaaaatgaggtggaaactgaattGCACTTCTTCCAAATGTATGACTATATTAGATACatgtatttccctcagattacacagacccacaaagaattcgaaaacaaatccaattttgataaactcccatatctattgggtgaaataccacagtcaacaatcacagcagcaagatttgtgacctgttgccacaagaaaaggtcaaccagtgaagaacaaacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU841748 True 228 lncRNA 0.38 1 70048141 70048368

Neighbor

gene id symbol gene type direction distance location
LOC110530442 foxc1 coding upstream 320667 69725327 ~ 69727474 (+)
foxf2a foxf2 coding upstream 344823 69699633 ~ 69703318 (+)
LOC110530440 foxq1 coding upstream 354179 69692289 ~ 69693962 (+)
LOC100499175 LOC106569154 coding upstream 457102 69578994 ~ 69591039 (+)
dusp22b LOC106569155 coding upstream 471325 69562986 ~ 69576816 (+)
wrnip1 wrnip1 coding downstream 54797 70103165 ~ 70127450 (+)
dhx30 dhx30 coding downstream 87087 70135455 ~ 70148930 (+)
LOC110530450 LOC106569144 coding downstream 124063 70172431 ~ 70186472 (+)
LOC110530454 LOC106569140 coding downstream 402639 70451007 ~ 70460534 (+)
LOC110530455 LOC106569138 coding downstream 415480 70463848 ~ 70493098 (+)
G741369 NA non-coding upstream 46944 70000866 ~ 70001197 (+)
G741162 NA non-coding upstream 200707 69847173 ~ 69847434 (+)
G741161 NA non-coding upstream 202544 69845381 ~ 69845597 (+)
G741148 NA non-coding upstream 225970 69821907 ~ 69822171 (+)
G741143 NA non-coding upstream 236508 69811417 ~ 69811633 (+)
G741425 NA non-coding downstream 7568 70055936 ~ 70062360 (+)
G741455 NA non-coding downstream 57785 70106153 ~ 70107065 (+)
G741494 NA non-coding downstream 119095 70167463 ~ 70168134 (+)
G741499 NA non-coding downstream 124917 70173285 ~ 70173781 (+)
G741547 NA non-coding downstream 223380 70271748 ~ 70275710 (+)
G740827 ripk1 other upstream 509865 69536400 ~ 69538276 (+)
G739708 NA other upstream 1043025 69004337 ~ 69005116 (+)
G739670 NA other upstream 1141176 68903365 ~ 68906965 (+)
G739648 NA other upstream 1189388 68858383 ~ 68858753 (+)
LOC110530413 NA other upstream 2125519 67904516 ~ 67924427 (+)
G742095 NA other downstream 577853 70626221 ~ 70626744 (+)
G742860 NA other downstream 1647234 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 2494358 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 2586516 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 2812040 72779485 ~ 72872336 (+)

Expression


Co-expression Network