G741425


Basic Information

Item Value
gene id G741425
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 70055936 ~ 70062360 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU841756
CAACACTTCCAAATGCATATCGAATTCAAAATGCATTTCACTCTGTTGCTTGGATCAGAAAAAGGACATTGTTTTTTATAGAAAAGATTTTACAGAATCTATTCTACTCTAACCTTCAAAACAATGACGATCAATGTTCAGTGGACAAGAGAAAGCAATTTCACGGTCTATACATCTGTAAACCTGAGAAAATATATATACCATAGAGGAAATGATAAAAAGTTTAAAACATTCAATACTAACAATATTTGAATCTAATAGGTAGTATACTTTCCAATAGCCAACCTTCATGGAAGGTAATAAAGTCGTTTTTATTTGATTACAATATGATAACATGCAGACAAGCATTAACAAACAACAATATTAACAATGCAAATTATTAAGCCCAACCCTACACATTGAAATAATGATGCATCATGTGTCATATATGTACTATTTTGGTTTTACTGAGCACATGCAAGCCAAAAACATGCTTTCATCAATTAAAATTAACAACAAAGGCCAAATAAAAAATTACCTGCTTAATCTTAAACAAAGGTTTTTaaataaaacaaagaaaaaaactgATAAGACTTGGATTATTTTAATTTACagtaaaaatgtttgttttttatacACACATGAACAAGTATAATGTAGGACATGACTACAGACATAGAAACATGTCACTTCTAACAAGGTATTTTTCCTTCAATGCTATGATTAGTTTGGTGAATTCATCTgatttaaataaataacaatataaaGTGGGCATACTAGAGCTTGAAAACAGACCACACCAATTGTTTgtttatgaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaattgtgAAATCATAACGAGCTGTCTCTGGAACTTAACCCTTAGATGCAGACCCTGATTCTGGGAGGCATTTTTTTACTTTGCCAATCATCTTGTTACAAAACATTGTTCACAACCATTTCCATTTGTACAACTCTTTCCTTAGAGAAAGCACAGCTTTTCCAAAAATACAATCTAGAATATATCAACAGCAATTAAAACAACAGATCAAATTATTTTAAGAAAATGAAAACAGGATAACAATGCCTTCCCAGACTAATGCCACCGAAAAAGTGTTAAGTACTCCAGATCCGCATTAAAGGGTTTAAGCACACATCTGCATATTTTATCTATTTACGCCAAATGTCACgagaacaaaaaacaaacaacaaacataTGACATTGGTCTATCTATCAGTCAAATTAAACAGGAAAATCCCTCGGTTTGCATGAATACACTCACATTCAGAGGAAAAGTGGGGTACAGTACTCAACATGGAACCCTTTTACATTAGCAGGAAATTAAATTAAAAAGAGATCAGAGTCACATCGAAGCATATATTGTGAGGTGCATTGTGGATAACTGATGTGTGAATCAAAATTTAATTCACACATGAAGGAAGAGAGCAGTAAAACTGTGTGAGCAGGGAAACAAACACACTTCGGATAAAAGTTCAGCTAGTTTGTCTGACAAAATCCCCAAAGTATTCACAAGATCAGGGCAGTTAGGTGTTGGTGTTCTGTTATACTGTCTTGCATTGTAGATTACATTCACATATCCAGCTAAATATCTTTTACTACACCTTCCAGTCTTCAAGGGCTCTACGCTTTCACACTAAACTGTGGGAATAGTACTTTTACTTTGTAAAAGTAAGATAACATGTATTGTCCATTCATCACACAGCTCTGGTAGTTCTACAGGTGTAGTTCAATAGGTGTAGGTTTTGTGAGCATCTGAGGGGTGTAGGGGTGAGAAAAGCCGGCTTTAGGCCCCATCTGGTGGCTAAACAACCCATTACAAGGTGTGGAATCTCTCCACAGAGACTTAATTGACTGCAGCTGCACATCTTGTACAGCTGGCTGCAATTAGGGCGGCAGAACATGGGGAGGCAGTGGatttcagagagggagagagaaagccgtGAGGAGGACACACCAAAGTTTTATCGCAAATATTGGACCAGTTTGCACCCAATGCCGAAGGTTTGAAGTTCTCTCTGCCCTGGGGTAAAATATTATCTTCCCCAGTGACTTACGTTTATGTTCAGTTGCTGACATAAGGGCCAGTTGTTGATTTTGATTATTGGCCTCATTTCTTTGTGAGAACATTCTTTTGGGACATGAAGATTCCCCAAGCTACCTGTGAaccctttatttatttaataaatccTCTTTGAGTGCTGAATTGCCTTGTCTGTCTGAGTTGTTACACTGGTGTAGAATGTAAGTGTCCCCGTGTGGTAGTGAAACCTGAGACAACCATTTAGACAAGTTATGGTGCCCTGTAGGCTGTGAGGACAGGGTTTTTTAAGTCGGTTTTTACAAGAGAAAATGCTGCTGGCAGAAGAATGGATGTCAAGTCCCTCAACCATGAGGTGGTTGGCGacggaggggactaagcaccaCACATAAGGGAGCACTGAAGAGCTCTGAAGGTAGTCTTGAGTTTCTCACAGGCCATAAATAACTCTgggctcccgggtggcgcagcgttctaaggcactgcatctcaatgcaagaggcatcactagagtccctggttcgaatccaggctgtatcacatccgctcatgattgggagtcccaaagagcggtacacaattggcccagcatcgtctgggtttggccggggtaggcagtcattgtaaataagaatttgttcttaactgacttgcgtagtttaATAAAGGGGCTCCTTGTGGATCCAGAGAGAAGACCAGCAAAGAGGCCCTGAAGGAGCGTCTGGGGTGCCTGTGCGCCGTCCTACAAGAAGAGCGTCATGGCCTCAAACGGCTCCATGAGAAGTCAAGGCAGCTGGCCACCTTGCAAGAGGAGACTTTCAGCAACAGGAAGAGGGTAACCTGGCTGAAAAGTCAACTGAAAGAGAATCAAGTATGGTCCTCAGCCTGCAGGAGAAGTGCAAGGACCAAGGGGAAGAGGTGAGAATGTAAAGACTAAGTTCCAGGATGTTGTAGTGACTTTGGAAGAAGAGGCCTGTTCTGAATCGTGAACATTTATCTTAAAGAGGTAGTTCACGCTGCCAATGAGCAATCTGAAAAGCTCATGAAAAGTAATGCTCGGCTCAGAGGAAAAGCTCAGGTGAGAAGAATTAGAGGCAGGAAAGCTGCAGCTGAAGAGGGTCCTGGAGGTCTCTGAGGTAGCTCACGAGTGTGCAGAAAAGGAGCATAGGGAGCAGGTAGCCAGCACCCAGAATTTAGAGATCTGCCGGCAGAGGGCAGAGCTACAAGGGGAAGCCCAGGCTGGGATGTTGGCCCTGTTGGAAGAAAAGCTGCACCCCAGTTCAAAACGAACAGGGGTTTCCACAAAGGTGCTGGACAAGCAGTAAGAGCAAGCAGACCGAGCAGGAACTGCCCAGGTAATTGAGAAGCAATGAAGAGGAACAATGTGCAGGCCTGTCTGGAAGAGGAGCAGGCAGCAAGAAGGCTTGAGCAGGAGGCAGTGAAGAGCCTCATAAGTGAATTGAAAAGGAATGAAGAGATGGCAAAGAAGTCAGCAATGGAAGCCAAGCAGAGAGTGGTGGAATTGATGGAGGAGAAGATGTCCCTGACAGGAAAAGCCTCTGAATTGCAATCATAAGTGGAAAACGTAATGAGGTTCAGTAAATGCAGGATGTCGTTCACAGGCTGGAGACATATAATATGGCCTCGAGGGCCAAGTGGGAGCAGATCTTCTTGTTGCTCAAAAATGAGCAGGAGAGGCTAAGTAGCCTTGAGGTGCAACTGCGTGAAAAGCATCAACACAGCCATCTGCTGAGGCAAGTCCTGGACTTAGAGGGGAGACGGAGCTCTGGTGGGATCAAATCCCACTCTCCATTTCAGGGGACATGTTTGCTCCTTCGTGTGAGTTGTTTACCCACACCACTGAACAGCCCCCTGACCGAAGAGAAAACAGCCTGTATGTCCAGAACCCATGGCCAGAGAAGATTAAAGGAATCGCGAAAAAGAAAACCTGGACCAGAGCATGGTTACACAGAGGGTTCCCAGGACAACCACACCAACAAGAATGTCAGTCCAAATACATTCCACTGATGACTCTCCCACTTTGTTTTCCCCAGAAGAGGTTTCAAGGTCCCCTGATGGTGAAGTGGTGACAGGGAGATGGCGGTCCAAAGGATTCAGCAGCGACCAGGGAAGTTCCAGTGCTCCAAAATCAAAAACTGGTTAGGAAACTGGGGTGAGCCCGTAGAAGGGCACTACCAGCCAAGAGGGAAGCAGCCCAATACTCTGGTGAGTGAAGTTTCGTCATGAGTTAAGAGGTCTGAAGGAAGGTTGAATTGTGATTCAGAAGTGAAGAGGTTTAAAGTCTGAAGTGTCTAACCATGGTTGACGTGAGTCTTCTTTCCAAAACCCAGAAGACAGAACTGCCAGCAGGTGGATCACTTGCACAGAAGGCAGTGAGACAAAGAACCCAACAGGGCGGTTGAGGCAACTGGCTCACCCTCAGGTCAAACCTCTGACACGACGCAGAGGAAAAATTCACAGCCAGAGAAGAAGAATCCCCTTTAAAGACAGGAAGAGGCCAAGGAGGCAGTGGAGCTCTGCCAGTCATCCACCCAGTCAAATGTGAATGGAAGAGCTACAAGACATGGGTGAGCCTGACAAACCAACTATGTTACTGAGCCTCCCcaggagtggtggagtgttggagaGTGGGCCTGGGAGTCAGAGGGCCTACTATGGTCAGGCAAGTTCATTAAGATGGATGATGGTTATATGGTAACCCAAGACTTTGCCAAGCTCTTGGTTACCAGGAGGCCTCAGGGAGAGTCTCCCAACTCCACAGAAACTGGTCAACTACCATCAGGTACACCACCAGGGGACAGCGAGCCCCACCTTTACCATGAGGTAAAGGTCCAAGATGGCACTGTGGTGGTGAGTATGACCAATGAAAAGGGATGTTCAGAAATGGAGAAACCTCAAACTCCTGGCATGGACCTTCAAATGTTCTTTGACCAGAGCTGAGGCAGGTGGCATGCTGTCGGGGTGCTCTATTTTGAAAATGTTGAAGAAGCATGGTTTTCCAAGAAGGGCTGGAGGAGACCAAAAGAAATGCCCTGTGAAAGAAAAGGGGCTTGAAGTAAaactgaggtaaaaaaaaaacatttctgaacATTTCTGTGATAATAACCCAAGACTTTGCAGAAACCCTGAGGCCCAAGTGGAAAAAGGCGAGCCGCTGTCATTCAAAGGAGAACGGGAAAGCTGGTGAGGAGGCACAGACGCATGGAGGTGAGAGCCTTCCCCCTCTCAATAACCAGTTATCGTGTGTGCCCCAGAAGGTGGCCGAGAACCAAACCCATGAAGAGGGTGAACCATGGAGATGATGAACATCAACCTTTGTTGTATGACCCCTAGAGGTCCAGGGGTGTACCTCCATGGCCTTGGATTAGATGCCTGGTCAAGAGTTGACTTTATCGGGGCATTGGCCTGTACAAACCACGAGTTGAAGCAGGGATGGGTGGTGTGTGAGCATCCGAGGGGTGTAAGGGTGGGAAAGGCCGGATTTTGGCCCCACTTGGTGGATAAACAACTCATTACAAGGTGTGGCATCTCTCCACAGAGACTTAATTGACTGCAGCTGCACATCTTGAACAGCTGGCTGCAATTAGGGTGGCAGAACATGGGGAGGCAGTGGcgttcagagagggagagagagagcagtgaggagGACACGCCTAACCATTGGACCAGTCAGCACCCAATGACGACGGTTTGAAGCTCTCTCTGCCCTGGGAGAAAATAAATCACTGGGAAAGAATACGATTACATTCAGTTATTGCCATAAAGGACCAGCTGTTGATTTTGATTATTGgccttatttttttttatctgttaaTAAATCCTATTTGAGTGCTGAATTGCCTTGTCTGTCTCTTGGTTTTGCACTACCACACATGACACACTGCTCCACCTACGGAGTTTTAACAGTTTAAATGTGTTCATACAGGTAAGCTCTGGTAGTTCTACAGGTGTACAGCAGGCTTGGTCCAAGTGGCCACCGCTGGCTCCGTCAAGTCATCATGCTGCTCAAAACATAAAGGGATAGAAAACAGTTCAGTTTCAGCAATGTCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU841756 True 6195 lncRNA 0.45 2 70055936 70062360

Neighbor

gene id symbol gene type direction distance location
LOC110530442 foxc1 coding upstream 328462 69725327 ~ 69727474 (+)
foxf2a foxf2 coding upstream 352618 69699633 ~ 69703318 (+)
LOC110530440 foxq1 coding upstream 361974 69692289 ~ 69693962 (+)
LOC100499175 LOC106569154 coding upstream 464897 69578994 ~ 69591039 (+)
dusp22b LOC106569155 coding upstream 479120 69562986 ~ 69576816 (+)
wrnip1 wrnip1 coding downstream 40805 70103165 ~ 70127450 (+)
dhx30 dhx30 coding downstream 73095 70135455 ~ 70148930 (+)
LOC110530450 LOC106569144 coding downstream 110071 70172431 ~ 70186472 (+)
LOC110530454 LOC106569140 coding downstream 388647 70451007 ~ 70460534 (+)
LOC110530455 LOC106569138 coding downstream 401488 70463848 ~ 70493098 (+)
G741417 NA non-coding upstream 7568 70048141 ~ 70048368 (+)
G741369 NA non-coding upstream 54739 70000866 ~ 70001197 (+)
G741162 NA non-coding upstream 208502 69847173 ~ 69847434 (+)
G741161 NA non-coding upstream 210339 69845381 ~ 69845597 (+)
G741148 NA non-coding upstream 233765 69821907 ~ 69822171 (+)
G741455 NA non-coding downstream 43793 70106153 ~ 70107065 (+)
G741494 NA non-coding downstream 105103 70167463 ~ 70168134 (+)
G741499 NA non-coding downstream 110925 70173285 ~ 70173781 (+)
G741547 NA non-coding downstream 209388 70271748 ~ 70275710 (+)
G741665 NA non-coding downstream 372805 70435165 ~ 70435374 (+)
G740827 ripk1 other upstream 517660 69536400 ~ 69538276 (+)
G739708 NA other upstream 1050820 69004337 ~ 69005116 (+)
G739670 NA other upstream 1148971 68903365 ~ 68906965 (+)
G739648 NA other upstream 1197183 68858383 ~ 68858753 (+)
LOC110530413 NA other upstream 2133314 67904516 ~ 67924427 (+)
G742095 NA other downstream 563861 70626221 ~ 70626744 (+)
G742860 NA other downstream 1633242 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 2480366 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 2572524 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 2798048 72779485 ~ 72872336 (+)

Expression


Co-expression Network