G741494


Basic Information

Item Value
gene id G741494
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 70167463 ~ 70168134 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU841831
ATTAAAGACCTCTGGGAGCCAGATGTCATGAAGATATTCTCGGGGGACGATGGTACACCACCATCTCGTCGAGAGATGAAGTTGGACACACTGCACTGTATATAAGAGATACCACCAGAGAGCGTGTATGAGCCTGATAAgatagagaagaagaaaaaagagaTGCATATcaaatataaacacacatcacatgcacactgaacaaaaatataaatgcaacatctaaagtgttggtcccatgtttcatgagctgaaataaaagatcccagaaaatgtccatatgcacaaatagcttatttctctcaaatgttgtgcacaaatttgtttacatcccggttagtgagcatttctcctttcccaagataatccatccaactgacaggtgtggcatatcaagaagctaattaaacagcatgatcattacacagatgcaccttgtgctggggacaataaatggccactctaaaatgccTCAGATGTCTCAATCTTTGAGGTAGcgttcaattggcatgctgactgcaagaatgccCACCAGAGCCGTTGCttgagaattgaatgttcatttgtcTACCAATGTTGTTGTAAATAATTTGGCAAtaagtccaaccagcctcacaaccacagaccaggtGTAATCACACcactccacatccggcttcttcacctgtggga

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU841831 True 672 lncRNA 0.42 1 70167463 70168134

Neighbor

gene id symbol gene type direction distance location
dhx30 dhx30 coding upstream 18533 70135455 ~ 70148930 (+)
wrnip1 wrnip1 coding upstream 40013 70103165 ~ 70127450 (+)
LOC110530442 foxc1 coding upstream 439989 69725327 ~ 69727474 (+)
foxf2a foxf2 coding upstream 464145 69699633 ~ 69703318 (+)
LOC110530440 foxq1 coding upstream 473501 69692289 ~ 69693962 (+)
LOC110530450 LOC106569144 coding downstream 4297 70172431 ~ 70186472 (+)
LOC110530454 LOC106569140 coding downstream 282873 70451007 ~ 70460534 (+)
LOC110530455 LOC106569138 coding downstream 295714 70463848 ~ 70493098 (+)
rpe65a LOC106569137 coding downstream 348354 70516488 ~ 70525948 (+)
LOC110530463 dtna coding downstream 536940 70705074 ~ 70743483 (+)
G741455 NA non-coding upstream 60398 70106153 ~ 70107065 (+)
G741425 NA non-coding upstream 105103 70055936 ~ 70062360 (+)
G741417 NA non-coding upstream 119095 70048141 ~ 70048368 (+)
G741369 NA non-coding upstream 166266 70000866 ~ 70001197 (+)
G741162 NA non-coding upstream 320029 69847173 ~ 69847434 (+)
G741499 NA non-coding downstream 5151 70173285 ~ 70173781 (+)
G741547 NA non-coding downstream 103614 70271748 ~ 70275710 (+)
G741665 NA non-coding downstream 267031 70435165 ~ 70435374 (+)
G741654 ccd16 non-coding downstream 273337 70441471 ~ 70463579 (+)
G741653 NA non-coding downstream 339716 70507850 ~ 70515932 (+)
G740827 ripk1 other upstream 629187 69536400 ~ 69538276 (+)
G739708 NA other upstream 1162347 69004337 ~ 69005116 (+)
G739670 NA other upstream 1260498 68903365 ~ 68906965 (+)
G739648 NA other upstream 1308710 68858383 ~ 68858753 (+)
LOC110530413 NA other upstream 2244841 67904516 ~ 67924427 (+)
G742095 NA other downstream 458087 70626221 ~ 70626744 (+)
G742860 NA other downstream 1527468 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 2374592 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 2466750 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 2692274 72779485 ~ 72872336 (+)

Expression


Co-expression Network