Gene
RNA
| Item | Value |
|---|---|
| gene id | G741547 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 70271748 ~ 70275710 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU841887 | True | 453 | lncRNA | 0.48 | 4 | 70271748 | 70275710 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530450 | LOC106569144 | coding | upstream | 85276 | 70172431 ~ 70186472 (+) |
| dhx30 | dhx30 | coding | upstream | 122818 | 70135455 ~ 70148930 (+) |
| wrnip1 | wrnip1 | coding | upstream | 144298 | 70103165 ~ 70127450 (+) |
| LOC110530442 | foxc1 | coding | upstream | 544274 | 69725327 ~ 69727474 (+) |
| foxf2a | foxf2 | coding | upstream | 568430 | 69699633 ~ 69703318 (+) |
| LOC110530454 | LOC106569140 | coding | downstream | 175297 | 70451007 ~ 70460534 (+) |
| LOC110530455 | LOC106569138 | coding | downstream | 188138 | 70463848 ~ 70493098 (+) |
| rpe65a | LOC106569137 | coding | downstream | 240778 | 70516488 ~ 70525948 (+) |
| LOC110530463 | dtna | coding | downstream | 429364 | 70705074 ~ 70743483 (+) |
| LOC110530464 | mapre2 | coding | downstream | 482294 | 70758004 ~ 70771560 (+) |
| G741499 | NA | non-coding | upstream | 97967 | 70173285 ~ 70173781 (+) |
| G741494 | NA | non-coding | upstream | 103614 | 70167463 ~ 70168134 (+) |
| G741455 | NA | non-coding | upstream | 164683 | 70106153 ~ 70107065 (+) |
| G741425 | NA | non-coding | upstream | 209388 | 70055936 ~ 70062360 (+) |
| G741417 | NA | non-coding | upstream | 223380 | 70048141 ~ 70048368 (+) |
| G741665 | NA | non-coding | downstream | 159455 | 70435165 ~ 70435374 (+) |
| G741654 | ccd16 | non-coding | downstream | 165761 | 70441471 ~ 70463579 (+) |
| G741653 | NA | non-coding | downstream | 232140 | 70507850 ~ 70515932 (+) |
| G741704 | NA | non-coding | downstream | 252948 | 70528658 ~ 70532557 (+) |
| G741748 | LOC106569134 | non-coding | downstream | 328766 | 70604476 ~ 70606732 (+) |
| G740827 | ripk1 | other | upstream | 733472 | 69536400 ~ 69538276 (+) |
| G739708 | NA | other | upstream | 1266632 | 69004337 ~ 69005116 (+) |
| G739670 | NA | other | upstream | 1364783 | 68903365 ~ 68906965 (+) |
| G739648 | NA | other | upstream | 1412995 | 68858383 ~ 68858753 (+) |
| LOC110530413 | NA | other | upstream | 2349126 | 67904516 ~ 67924427 (+) |
| G742095 | NA | other | downstream | 350511 | 70626221 ~ 70626744 (+) |
| G742860 | NA | other | downstream | 1419892 | 71695602 ~ 71715616 (+) |
| LOC110530976 | LOC106569323 | other | downstream | 2267016 | 72542055 ~ 72555556 (+) |
| LOC110530502 | LOC106569321 | other | downstream | 2359174 | 72634238 ~ 72714065 (+) |
| LOC110530507 | LOC106569317 | other | downstream | 2584698 | 72779485 ~ 72872336 (+) |
