G742115 (LOC106569133)


Basic Information

Item Value
gene id G742115
gene name LOC106569133
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 70650336 ~ 70651128 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU842499
GTCTGCCTGCAGTGCTGTCTGAAGGGCATCAGGTGGTAGTTCATGGCATCCATCAGCAGCTTCTGGCACACTGGGTCACTCCTCATGAAGTCAACCGACTGCACCCTCTCCACCAGCTCTGGGGCCGGGATGAGGGCGAAGCGCAGCCTCTTCATCAGGTCCGGGGCGTAGTGCATGCGAGTCTCCCGGTCATGCTCCAGCCACAGCACAGACATCTGGAAGAGGGCCAGCTCTGACTCCACCGGGGGCGGCAGAGCGTCCAGCATGGCGCACATCTCCTCAAAGTTCAGCAGCAGCACATCCTCCACCAGGTACTTGTTGGCCAGCTTCTTGGTCTCGTCCAAGCCGTGCAGTGCTGCGATCTTGCAGATCTGCTTGTAGTTCTGTACAGAGATCTGGTCGTTGAGGAACTGCACGCTGAGCTTGGTGATCTGGGGGACATTAAGGATCTTGCTGACTGAGAGCACCTCTTCCACAGTGTCCAGAGAGAGAGTGACGTTGGCAGTGTACAGGTACTCCAGCACTAGCCGTAGTCCGATGGAGGAGCAGCCTTGGAGGACCAGGTTGTTGATGGACCGGGTGCTTGCCATCAGCTTGTCATCGGGGGAGGAAGATGGGGTACCACTGCTCCCCTGGTCCTTGTTGTTGTTGGTCCCCTCGTTGTTGAGCATATGACTGCTGGAAAAGAGACACCTGAAATACTGAGAGCAGGACGCCAGCACTGCTTTGTGGCAGTGGAACTGCTGTCCTTGGGCAGTGAGAGTCACATCACAGAAAAGCTGTTTCCTCCATA

Function

NR:

description
kelch-like protein 14

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU842499 True 793 lncRNA 0.57 1 70650336 70651128

Neighbor

gene id symbol gene type direction distance location
rpe65a LOC106569137 coding upstream 124388 70516488 ~ 70525948 (+)
LOC110530455 LOC106569138 coding upstream 157238 70463848 ~ 70493098 (+)
LOC110530454 LOC106569140 coding upstream 189802 70451007 ~ 70460534 (+)
LOC110530450 LOC106569144 coding upstream 463864 70172431 ~ 70186472 (+)
dhx30 dhx30 coding upstream 501406 70135455 ~ 70148930 (+)
LOC110530463 dtna coding downstream 53946 70705074 ~ 70743483 (+)
LOC110530464 mapre2 coding downstream 106876 70758004 ~ 70771560 (+)
LOC110530465 LOC106569128 coding downstream 179583 70830711 ~ 70841350 (+)
LOC110530467 ub2v2 coding downstream 190379 70841507 ~ 70844898 (+)
LOC110530469 LOC106569124 coding downstream 285276 70936404 ~ 70975314 (+)
G742108 NA non-coding upstream 9807 70639262 ~ 70640529 (+)
G742094 NA non-coding upstream 24914 70625147 ~ 70625422 (+)
G742087 NA non-coding upstream 30986 70619114 ~ 70619350 (+)
G741748 LOC106569134 non-coding upstream 43604 70604476 ~ 70606732 (+)
G741704 NA non-coding upstream 117779 70528658 ~ 70532557 (+)
G742116 NA non-coding downstream 1012 70652140 ~ 70652591 (+)
G742120 NA non-coding downstream 7121 70658249 ~ 70658452 (+)
G742130 NA non-coding downstream 24459 70675587 ~ 70676674 (+)
G742131 NA non-coding downstream 27566 70678694 ~ 70678897 (+)
G742154 NA non-coding downstream 73991 70725119 ~ 70774362 (+)
G742095 NA other upstream 23592 70626221 ~ 70626744 (+)
G740827 ripk1 other upstream 1112060 69536400 ~ 69538276 (+)
G739708 NA other upstream 1645220 69004337 ~ 69005116 (+)
G739670 NA other upstream 1743371 68903365 ~ 68906965 (+)
G739648 NA other upstream 1791583 68858383 ~ 68858753 (+)
G742860 NA other downstream 1044474 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 1891598 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 1983756 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 2209280 72779485 ~ 72872336 (+)
G744696 NA other downstream 2211128 72862256 ~ 72864703 (+)

Expression


Co-expression Network