G742131


Basic Information

Item Value
gene id G742131
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 70678694 ~ 70678897 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU842515
ctctccttctgtcCGCTTTGACCTCCTCTCACATCTCACCACATATTAGCCACCCATTATCCAGTAATTGAAGATCTCCACTTCTCCATGCACCCCTGCAGATTCAGAATTACGTGCCTACTACTTTTTCAGGAAAACATGAGAAAGGTAGCTCGGGGTTATTCAACCTAGGAACACAGGAGGGTTTGTAGTTGTACCATAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU842515 True 204 lncRNA 0.45 1 70678694 70678897

Neighbor

gene id symbol gene type direction distance location
rpe65a LOC106569137 coding upstream 152746 70516488 ~ 70525948 (+)
LOC110530455 LOC106569138 coding upstream 185596 70463848 ~ 70493098 (+)
LOC110530454 LOC106569140 coding upstream 218160 70451007 ~ 70460534 (+)
LOC110530450 LOC106569144 coding upstream 492222 70172431 ~ 70186472 (+)
dhx30 dhx30 coding upstream 529764 70135455 ~ 70148930 (+)
LOC110530463 dtna coding downstream 26177 70705074 ~ 70743483 (+)
LOC110530464 mapre2 coding downstream 79107 70758004 ~ 70771560 (+)
LOC110530465 LOC106569128 coding downstream 151814 70830711 ~ 70841350 (+)
LOC110530467 ub2v2 coding downstream 162610 70841507 ~ 70844898 (+)
LOC110530469 LOC106569124 coding downstream 257507 70936404 ~ 70975314 (+)
G742130 NA non-coding upstream 2020 70675587 ~ 70676674 (+)
G742120 NA non-coding upstream 20242 70658249 ~ 70658452 (+)
G742116 NA non-coding upstream 26103 70652140 ~ 70652591 (+)
G742115 LOC106569133 non-coding upstream 27566 70650336 ~ 70651128 (+)
G742108 NA non-coding upstream 38165 70639262 ~ 70640529 (+)
G742154 NA non-coding downstream 46222 70725119 ~ 70774362 (+)
G742195 NA non-coding downstream 134051 70812948 ~ 70813165 (+)
G742220 NA non-coding downstream 190672 70869569 ~ 70869813 (+)
G742222 NA non-coding downstream 191672 70870569 ~ 70870774 (+)
G742224 NA non-coding downstream 193956 70872853 ~ 70873079 (+)
G742095 NA other upstream 51950 70626221 ~ 70626744 (+)
G740827 ripk1 other upstream 1140418 69536400 ~ 69538276 (+)
G739708 NA other upstream 1673578 69004337 ~ 69005116 (+)
G739670 NA other upstream 1771729 68903365 ~ 68906965 (+)
G739648 NA other upstream 1819941 68858383 ~ 68858753 (+)
G742860 NA other downstream 1016705 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 1863829 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 1955987 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 2181511 72779485 ~ 72872336 (+)
G744696 NA other downstream 2183359 72862256 ~ 72864703 (+)

Expression


Co-expression Network