G742220


Basic Information

Item Value
gene id G742220
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 70869569 ~ 70869813 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU842624
CATTCAAACATCATCTCtgttacataccaccacagaccattgctggcactaaaaccgcactcaatgagctgtatatctaacctggaagcttataagaaatgttgctatgccctccgacaaaccatcaaacacgcaaagcatcaatacaggactaagatcgaatcgtacaacaccggctccgacactcgtcggatgtggcagggcttgcaaactattacagactacaaagggaagcacagccgaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU842624 True 245 lncRNA 0.46 1 70869569 70869813

Neighbor

gene id symbol gene type direction distance location
LOC110530467 ub2v2 coding upstream 24671 70841507 ~ 70844898 (+)
LOC110530465 LOC106569128 coding upstream 28219 70830711 ~ 70841350 (+)
LOC110530464 mapre2 coding upstream 98009 70758004 ~ 70771560 (+)
LOC110530463 dtna coding upstream 126086 70705074 ~ 70743483 (+)
rpe65a LOC106569137 coding upstream 343621 70516488 ~ 70525948 (+)
LOC110530469 LOC106569124 coding downstream 66591 70936404 ~ 70975314 (+)
LOC110530474 LOC106569352 coding downstream 265569 71135382 ~ 71412296 (+)
asic1c LOC106569349 coding downstream 611151 71480964 ~ 71640255 (+)
atg9b LOC106569346 coding downstream 789295 71659108 ~ 71682417 (+)
LOC110530483 obscn coding downstream 857975 71727788 ~ 71818121 (+)
G742195 NA non-coding upstream 56404 70812948 ~ 70813165 (+)
G742154 NA non-coding upstream 95207 70725119 ~ 70774362 (+)
G742131 NA non-coding upstream 190672 70678694 ~ 70678897 (+)
G742130 NA non-coding upstream 192895 70675587 ~ 70676674 (+)
G742120 NA non-coding upstream 211117 70658249 ~ 70658452 (+)
G742222 NA non-coding downstream 756 70870569 ~ 70870774 (+)
G742224 NA non-coding downstream 3040 70872853 ~ 70873079 (+)
G742228 NA non-coding downstream 6690 70876503 ~ 70876781 (+)
G742241 NA non-coding downstream 20565 70890378 ~ 70890861 (+)
G742243 NA non-coding downstream 23927 70893740 ~ 70893964 (+)
G742095 NA other upstream 242825 70626221 ~ 70626744 (+)
G740827 ripk1 other upstream 1331293 69536400 ~ 69538276 (+)
G739708 NA other upstream 1864453 69004337 ~ 69005116 (+)
G739670 NA other upstream 1962604 68903365 ~ 68906965 (+)
G739648 NA other upstream 2010816 68858383 ~ 68858753 (+)
G742860 NA other downstream 825789 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 1672913 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 1765071 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 1990595 72779485 ~ 72872336 (+)
G744696 NA other downstream 1992443 72862256 ~ 72864703 (+)

Expression


Co-expression Network