G742224


Basic Information

Item Value
gene id G742224
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 70872853 ~ 70873079 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU842628
gcagtgtgtgcaaacctggtcaagaactacaggaaacatatgatctctgtaattgcaaacaaagatttctgtaccaaatattaagttctgcttttctgatgtatcaaatacttatgtcatgcaataaaatgcaaattaattacaaaaaaattatacaatgtgattttctggatctttgttttagattccgtctctcacagttgaagtgtacctatgataaaaatgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU842628 True 227 lncRNA 0.31 1 70872853 70873079

Neighbor

gene id symbol gene type direction distance location
LOC110530467 ub2v2 coding upstream 27955 70841507 ~ 70844898 (+)
LOC110530465 LOC106569128 coding upstream 31503 70830711 ~ 70841350 (+)
LOC110530464 mapre2 coding upstream 101293 70758004 ~ 70771560 (+)
LOC110530463 dtna coding upstream 129370 70705074 ~ 70743483 (+)
rpe65a LOC106569137 coding upstream 346905 70516488 ~ 70525948 (+)
LOC110530469 LOC106569124 coding downstream 63325 70936404 ~ 70975314 (+)
LOC110530474 LOC106569352 coding downstream 262303 71135382 ~ 71412296 (+)
asic1c LOC106569349 coding downstream 607885 71480964 ~ 71640255 (+)
atg9b LOC106569346 coding downstream 786029 71659108 ~ 71682417 (+)
LOC110530483 obscn coding downstream 854709 71727788 ~ 71818121 (+)
G742222 NA non-coding upstream 2079 70870569 ~ 70870774 (+)
G742220 NA non-coding upstream 3040 70869569 ~ 70869813 (+)
G742195 NA non-coding upstream 59688 70812948 ~ 70813165 (+)
G742154 NA non-coding upstream 98491 70725119 ~ 70774362 (+)
G742131 NA non-coding upstream 193956 70678694 ~ 70678897 (+)
G742228 NA non-coding downstream 3424 70876503 ~ 70876781 (+)
G742241 NA non-coding downstream 17299 70890378 ~ 70890861 (+)
G742243 NA non-coding downstream 20661 70893740 ~ 70893964 (+)
G742435 NA non-coding downstream 41811 70914890 ~ 70972639 (+)
G742442 NA non-coding downstream 50498 70923577 ~ 70927862 (+)
G742095 NA other upstream 246109 70626221 ~ 70626744 (+)
G740827 ripk1 other upstream 1334577 69536400 ~ 69538276 (+)
G739708 NA other upstream 1867737 69004337 ~ 69005116 (+)
G739670 NA other upstream 1965888 68903365 ~ 68906965 (+)
G739648 NA other upstream 2014100 68858383 ~ 68858753 (+)
G742860 NA other downstream 822523 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 1669647 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 1761805 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 1987329 72779485 ~ 72872336 (+)
G744696 NA other downstream 1989177 72862256 ~ 72864703 (+)

Expression


Co-expression Network