G742228


Basic Information

Item Value
gene id G742228
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 70876503 ~ 70876781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU842632
gacaaaatgatatctttccaacagataagatctaaaccaggccagaacttgtctgtgtagatcAATtcgggtttccaatctctccaaaagaatgtggtgatcgatggtatcaaaagcagcactaaggtctaggagcatgaggacagatgcaaagcctcggtctgattccattaaaaggtaatttaccaccttcaaaagtgcagtctcagtgctatgatggggtctaaaaccagactgtagcatttcgtatacattgtttgtcttcaggaaggcaatgAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU842632 True 279 lncRNA 0.41 1 70876503 70876781

Neighbor

gene id symbol gene type direction distance location
LOC110530467 ub2v2 coding upstream 31605 70841507 ~ 70844898 (+)
LOC110530465 LOC106569128 coding upstream 35153 70830711 ~ 70841350 (+)
LOC110530464 mapre2 coding upstream 104943 70758004 ~ 70771560 (+)
LOC110530463 dtna coding upstream 133020 70705074 ~ 70743483 (+)
rpe65a LOC106569137 coding upstream 350555 70516488 ~ 70525948 (+)
LOC110530469 LOC106569124 coding downstream 59623 70936404 ~ 70975314 (+)
LOC110530474 LOC106569352 coding downstream 258601 71135382 ~ 71412296 (+)
asic1c LOC106569349 coding downstream 604183 71480964 ~ 71640255 (+)
atg9b LOC106569346 coding downstream 782327 71659108 ~ 71682417 (+)
LOC110530483 obscn coding downstream 851007 71727788 ~ 71818121 (+)
G742224 NA non-coding upstream 3424 70872853 ~ 70873079 (+)
G742222 NA non-coding upstream 5729 70870569 ~ 70870774 (+)
G742220 NA non-coding upstream 6690 70869569 ~ 70869813 (+)
G742195 NA non-coding upstream 63338 70812948 ~ 70813165 (+)
G742154 NA non-coding upstream 102141 70725119 ~ 70774362 (+)
G742241 NA non-coding downstream 13597 70890378 ~ 70890861 (+)
G742243 NA non-coding downstream 16959 70893740 ~ 70893964 (+)
G742435 NA non-coding downstream 38109 70914890 ~ 70972639 (+)
G742442 NA non-coding downstream 46796 70923577 ~ 70927862 (+)
G742451 NA non-coding downstream 101574 70978355 ~ 71061889 (+)
G742095 NA other upstream 249759 70626221 ~ 70626744 (+)
G740827 ripk1 other upstream 1338227 69536400 ~ 69538276 (+)
G739708 NA other upstream 1871387 69004337 ~ 69005116 (+)
G739670 NA other upstream 1969538 68903365 ~ 68906965 (+)
G739648 NA other upstream 2017750 68858383 ~ 68858753 (+)
G742860 NA other downstream 818821 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 1665945 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 1758103 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 1983627 72779485 ~ 72872336 (+)
G744696 NA other downstream 1985475 72862256 ~ 72864703 (+)

Expression


Co-expression Network