G742241


Basic Information

Item Value
gene id G742241
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 70890378 ~ 70890861 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU842645
ctacaaagggaagcacagccgtcagctgcccagtgacatgagcctaccagaagagctaaatTATATTCTCGTTTTGagacaagtaacactgaaacatgcatgagagcatcagccattccggacgactgtgtgatcaactcaaattttatttgtcacatacacatggttagcagatgttaatgcgagtgtagcgaaatgcttgcgcttctagttccgacaatgcagtaataaccaacaagtaatctaactaacaattccaaaactactgtcttatacacagtgtaaggggataaagaatatgcacataaggatatatgaatgagtgatggtacagagcagcataggcaggatacagtagatggtatcgagtacagtatatacatgaggtgagtatgtaaacaaagtggcagagttaaagtggctagtgatacatgtattacataaggatgcagtcgatgatatagagtacagtatatacgtatgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU842645 True 484 lncRNA 0.40 1 70890378 70890861

Neighbor

gene id symbol gene type direction distance location
LOC110530467 ub2v2 coding upstream 45480 70841507 ~ 70844898 (+)
LOC110530465 LOC106569128 coding upstream 49028 70830711 ~ 70841350 (+)
LOC110530464 mapre2 coding upstream 118818 70758004 ~ 70771560 (+)
LOC110530463 dtna coding upstream 146895 70705074 ~ 70743483 (+)
rpe65a LOC106569137 coding upstream 364430 70516488 ~ 70525948 (+)
LOC110530469 LOC106569124 coding downstream 45543 70936404 ~ 70975314 (+)
LOC110530474 LOC106569352 coding downstream 244521 71135382 ~ 71412296 (+)
asic1c LOC106569349 coding downstream 590103 71480964 ~ 71640255 (+)
atg9b LOC106569346 coding downstream 768247 71659108 ~ 71682417 (+)
LOC110530483 obscn coding downstream 836927 71727788 ~ 71818121 (+)
G742228 NA non-coding upstream 13597 70876503 ~ 70876781 (+)
G742224 NA non-coding upstream 17299 70872853 ~ 70873079 (+)
G742222 NA non-coding upstream 19604 70870569 ~ 70870774 (+)
G742220 NA non-coding upstream 20565 70869569 ~ 70869813 (+)
G742195 NA non-coding upstream 77213 70812948 ~ 70813165 (+)
G742243 NA non-coding downstream 2879 70893740 ~ 70893964 (+)
G742435 NA non-coding downstream 24029 70914890 ~ 70972639 (+)
G742442 NA non-coding downstream 32716 70923577 ~ 70927862 (+)
G742451 NA non-coding downstream 87494 70978355 ~ 71061889 (+)
G742455 NA non-coding downstream 100155 70991016 ~ 70992013 (+)
G742095 NA other upstream 263634 70626221 ~ 70626744 (+)
G740827 ripk1 other upstream 1352102 69536400 ~ 69538276 (+)
G739708 NA other upstream 1885262 69004337 ~ 69005116 (+)
G739670 NA other upstream 1983413 68903365 ~ 68906965 (+)
G739648 NA other upstream 2031625 68858383 ~ 68858753 (+)
G742860 NA other downstream 804741 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 1651865 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 1744023 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 1969547 72779485 ~ 72872336 (+)
G744696 NA other downstream 1971395 72862256 ~ 72864703 (+)

Expression


Co-expression Network