G742451


Basic Information

Item Value
gene id G742451
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 70978355 ~ 71061889 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU842881
acactcttgacattctctcaaccagcttcatgaggaatgcttttccaacagccttgaaggagttcccacatatgctgagcacctgttggctgcttttccttcagtctggggtccaactcatcccaaaccatctcaaatgggttgaggttgggtgattgtggaggccaggtcatctgattcagcactctctttcttggtcaaatagcctttacacagtctggaggtgtgttttaggtcattgtcctgttgaaaaacaaattatagtcccactaagcacaaaccagatgggatggtatatcgctgcagaatgctgtggtagccatgctggttaagtgtgccttaaattctaaataaattagtgtcaccagcaaaacaacCCCAAaaccatcccacctcctcctccctgcttcacggtggaaaccacacaagcggagatcatccgttcacctactctgtgtttcaCAAAGACAgcatttggaaccaaaaatctcaaatttggactcatcagaacaaaggacagatttccaccggtctaatgtccattgctcatgtttcttggtccaagcaagtctcttcttcttattgatgtcctttagtagtggtttctttgcagcaatttgaccatgaaggcctgattcacacagtctcctctgaacagttgatgctgagatgtgtctgttacttgaactctgagaagcatttatttgggctgcaatttctacggctggtagctctaatgaacttatcctctgcagctagaggtaactctgggttttcctttcctgtggcggtcttcatgagtgccagtttcatcataccgtttgatggattttgcgactgcacttgaagaaactttcaaagttcttgaaatgttccagattaagacatgaaggtcagtcaaagtaATGATGGgaatgtcgtttctctttgcttatttaagtggttcttgccataatatggacttggtcttttaccaaatagggctcttaTATATAGGTagtatcttctgtatactacccctaccttgtcacaagacaactgtttggctcaaacgcattaagaaggaacgaaattccacaaattaacttttaacaaggaacacctgttaaatgaaatgcattccaggtgactacctcatgaagctggtcgaGAGAATACCAaaagccaaagggtggctactttgaataatctcttaaaatatatttggatttctttaacacttttttggttactatatgattccatatgtgttatttaatagttttgatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU842881 True 1270 lncRNA 0.41 2 70978355 71061889

Neighbor

gene id symbol gene type direction distance location
LOC110530469 LOC106569124 coding upstream 3041 70936404 ~ 70975314 (+)
LOC110530467 ub2v2 coding upstream 133457 70841507 ~ 70844898 (+)
LOC110530465 LOC106569128 coding upstream 137005 70830711 ~ 70841350 (+)
LOC110530464 mapre2 coding upstream 206795 70758004 ~ 70771560 (+)
LOC110530463 dtna coding upstream 234872 70705074 ~ 70743483 (+)
LOC110530474 LOC106569352 coding downstream 73493 71135382 ~ 71412296 (+)
asic1c LOC106569349 coding downstream 419075 71480964 ~ 71640255 (+)
atg9b LOC106569346 coding downstream 597219 71659108 ~ 71682417 (+)
LOC110530483 obscn coding downstream 665899 71727788 ~ 71818121 (+)
c8h1orf35 cssa14h1orf35 coding downstream 766148 71828037 ~ 71832556 (+)
G742435 NA non-coding upstream 5716 70914890 ~ 70972639 (+)
G742442 NA non-coding upstream 50493 70923577 ~ 70927862 (+)
G742243 NA non-coding upstream 84391 70893740 ~ 70893964 (+)
G742241 NA non-coding upstream 87494 70890378 ~ 70890861 (+)
G742228 NA non-coding upstream 101574 70876503 ~ 70876781 (+)
G742567 NA non-coding downstream 64209 71126098 ~ 71126300 (+)
G742611 NA non-coding downstream 126657 71188546 ~ 71204806 (+)
G742610 NA non-coding downstream 127397 71189286 ~ 71194646 (+)
G742802 NA non-coding downstream 495290 71557179 ~ 71562042 (+)
G742748 NA non-coding downstream 518528 71580417 ~ 71638350 (+)
G742095 NA other upstream 351611 70626221 ~ 70626744 (+)
G740827 ripk1 other upstream 1440079 69536400 ~ 69538276 (+)
G739708 NA other upstream 1973239 69004337 ~ 69005116 (+)
G739670 NA other upstream 2071390 68903365 ~ 68906965 (+)
G739648 NA other upstream 2119602 68858383 ~ 68858753 (+)
G742860 NA other downstream 633713 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 1480837 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 1572995 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 1798519 72779485 ~ 72872336 (+)
G744696 NA other downstream 1800367 72862256 ~ 72864703 (+)

Expression


Co-expression Network