G742477


Basic Information

Item Value
gene id G742477
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 71011860 ~ 71012275 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU842915
AAAAGGACAGACCGACATATATCACAAACGGGACTGATTGACATTATGTGCTTGATCTTAAGGATAGCTTTTCTCTTGGTCCAAGTAAGAGGTCACTGTTACACCTCCATCAACTCAGCCCATGTGGACCAAATGATCCGGCCGGGCCACAGCTTCAGCCTGGCCTGTGAGTTTGTCTGCCTGCAGCCCAGCCAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU842915 True 195 lncRNA 0.50 2 71011860 71012275

Neighbor

gene id symbol gene type direction distance location
LOC110530469 LOC106569124 coding upstream 36546 70936404 ~ 70975314 (+)
LOC110530467 ub2v2 coding upstream 166962 70841507 ~ 70844898 (+)
LOC110530465 LOC106569128 coding upstream 170510 70830711 ~ 70841350 (+)
LOC110530464 mapre2 coding upstream 240300 70758004 ~ 70771560 (+)
LOC110530463 dtna coding upstream 268377 70705074 ~ 70743483 (+)
LOC110530474 LOC106569352 coding downstream 123107 71135382 ~ 71412296 (+)
asic1c LOC106569349 coding downstream 468689 71480964 ~ 71640255 (+)
atg9b LOC106569346 coding downstream 646833 71659108 ~ 71682417 (+)
LOC110530483 obscn coding downstream 715513 71727788 ~ 71818121 (+)
c8h1orf35 cssa14h1orf35 coding downstream 815762 71828037 ~ 71832556 (+)
G742473 NA non-coding upstream 15035 70996117 ~ 70996825 (+)
G742455 NA non-coding upstream 19847 70991016 ~ 70992013 (+)
G742435 NA non-coding upstream 39221 70914890 ~ 70972639 (+)
G742442 NA non-coding upstream 83998 70923577 ~ 70927862 (+)
G742243 NA non-coding upstream 117896 70893740 ~ 70893964 (+)
G742567 NA non-coding downstream 113823 71126098 ~ 71126300 (+)
G742611 NA non-coding downstream 176271 71188546 ~ 71204806 (+)
G742610 NA non-coding downstream 177011 71189286 ~ 71194646 (+)
G742802 NA non-coding downstream 544904 71557179 ~ 71562042 (+)
G742748 NA non-coding downstream 568142 71580417 ~ 71638350 (+)
G742095 NA other upstream 385116 70626221 ~ 70626744 (+)
G740827 ripk1 other upstream 1473584 69536400 ~ 69538276 (+)
G739708 NA other upstream 2006744 69004337 ~ 69005116 (+)
G739670 NA other upstream 2104895 68903365 ~ 68906965 (+)
G739648 NA other upstream 2153107 68858383 ~ 68858753 (+)
G742860 NA other downstream 683327 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 1530451 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 1622609 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 1848133 72779485 ~ 72872336 (+)
G744696 NA other downstream 1849981 72862256 ~ 72864703 (+)

Expression


Co-expression Network