G742904


Basic Information

Item Value
gene id G742904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 71843791 ~ 71844084 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU843397
cttcttctccggcaactgagttaagaaggacgcctatatctttgtagtgactgagtgtattgatacactatccaaagtgtaattaataacttcaccatgcttaaagggatattcaatgtctgcgtTTTTTTAttgtaccaataggtgcccttctttgctaggcattggaaaacctccctggtctttgtggttgaatctttgtttgaaattctctgctcgactgagggaccttacaattatctgtatgtgtggggtacagagatgatgtagtcattcaaaaatcttcttaaaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU843397 True 294 lncRNA 0.38 1 71843791 71844084

Neighbor

gene id symbol gene type direction distance location
c8h1orf35 cssa14h1orf35 coding upstream 11235 71828037 ~ 71832556 (+)
LOC110530483 obscn coding upstream 25670 71727788 ~ 71818121 (+)
atg9b LOC106569346 coding upstream 161493 71659108 ~ 71682417 (+)
asic1c LOC106569349 coding upstream 203536 71480964 ~ 71640255 (+)
LOC110530474 LOC106569352 coding upstream 431495 71135382 ~ 71412296 (+)
wnt9a wnt9a coding downstream 63475 71907559 ~ 71934937 (+)
LOC110530489 iba57 coding downstream 253308 72097392 ~ 72103866 (+)
LOC110530494 LOC106569334 coding downstream 302269 72146353 ~ 72155430 (+)
LOC110529137 LOC106569331 coding downstream 347083 72191167 ~ 72219447 (+)
LOC110530496 LOC100136504 coding downstream 497412 72341496 ~ 72345654 (+)
G742573 arf1 non-coding upstream 6027 71833627 ~ 71837764 (+)
G742860 NA non-coding upstream 128175 71695602 ~ 71715616 (+)
G742854 NA non-coding upstream 190357 71653206 ~ 71653434 (+)
G742853 NA non-coding upstream 190956 71652483 ~ 71652835 (+)
G743613 NA non-coding downstream 93347 71937431 ~ 71937872 (+)
G743630 NA non-coding downstream 103607 71947691 ~ 71947980 (+)
G743631 NA non-coding downstream 104328 71948412 ~ 71948695 (+)
G743633 NA non-coding downstream 104999 71949083 ~ 71949294 (+)
G742095 NA other upstream 1217047 70626221 ~ 70626744 (+)
G740827 ripk1 other upstream 2305515 69536400 ~ 69538276 (+)
G739708 NA other upstream 2838675 69004337 ~ 69005116 (+)
G739670 NA other upstream 2936826 68903365 ~ 68906965 (+)
LOC110530976 LOC106569323 other downstream 698642 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 790800 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 1016324 72779485 ~ 72872336 (+)
G744696 NA other downstream 1018172 72862256 ~ 72864703 (+)
G744697 NA other downstream 1023017 72867101 ~ 72868382 (+)

Expression


Co-expression Network