G743633


Basic Information

Item Value
gene id G743633
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 71949083 ~ 71949294 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU844209
gtgaagaagaaggagggaggtctgcgtccgtgcactGATTATAAAGGTCTAAATTcaatcacagtggggtttagttacccactacctctcatcgctacggcggtggaatcatttcacggggcgcatttcttcacaaaactggacccgAGGAGTACAtataacctggtgcgtatccggggaggagatgagtggaaaaccgcatttagcactac

Function

NR:

description
PREDICTED: RNA-directed DNA polymerase homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU844209 True 212 lncRNA 0.50 1 71949083 71949294

Neighbor

gene id symbol gene type direction distance location
wnt9a wnt9a coding upstream 15222 71907559 ~ 71934937 (+)
c8h1orf35 cssa14h1orf35 coding upstream 116527 71828037 ~ 71832556 (+)
LOC110530483 obscn coding upstream 130962 71727788 ~ 71818121 (+)
atg9b LOC106569346 coding upstream 266785 71659108 ~ 71682417 (+)
asic1c LOC106569349 coding upstream 308828 71480964 ~ 71640255 (+)
LOC110530489 iba57 coding downstream 148098 72097392 ~ 72103866 (+)
LOC110530494 LOC106569334 coding downstream 197059 72146353 ~ 72155430 (+)
LOC110529137 LOC106569331 coding downstream 241873 72191167 ~ 72219447 (+)
LOC110530496 LOC100136504 coding downstream 392202 72341496 ~ 72345654 (+)
LOC110530498 LOC106569327 coding downstream 544751 72494045 ~ 72496970 (+)
G743631 NA non-coding upstream 388 71948412 ~ 71948695 (+)
G743630 NA non-coding upstream 1103 71947691 ~ 71947980 (+)
G743613 NA non-coding upstream 11211 71937431 ~ 71937872 (+)
G742904 NA non-coding upstream 104999 71843791 ~ 71844084 (+)
G743647 NA non-coding downstream 10300 71959594 ~ 71960167 (+)
G743688 NA non-coding downstream 37029 71986323 ~ 71986537 (+)
G743718 NA non-coding downstream 61847 72011141 ~ 72015844 (+)
G743745 NA non-coding downstream 81118 72030412 ~ 72076863 (+)
G743779 NA non-coding downstream 120659 72069953 ~ 72079793 (+)
G742860 NA other upstream 233467 71695602 ~ 71715616 (+)
G742095 NA other upstream 1322339 70626221 ~ 70626744 (+)
G740827 ripk1 other upstream 2410807 69536400 ~ 69538276 (+)
G739708 NA other upstream 2943967 69004337 ~ 69005116 (+)
G739670 NA other upstream 3042118 68903365 ~ 68906965 (+)
LOC110530976 LOC106569323 other downstream 593432 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 685590 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 911114 72779485 ~ 72872336 (+)
G744696 NA other downstream 912962 72862256 ~ 72864703 (+)
G744697 NA other downstream 917807 72867101 ~ 72868382 (+)

Expression


Co-expression Network