G744148


Basic Information

Item Value
gene id G744148
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 72350840 ~ 72353262 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU844757
aaaaacatatttacgTCATAACATTTGTACAATTACTAATTACAATATACAACAAACTTTAAAAGAGTTTATGTACATTACAACGAAACATTTTGGTTATACATGTTTTATCGCACTCTTTGATGATATATTCTTATTTTTAGACCTTCTCAAACTAGAACCCCTAAATCTGAGTAAAACTTCTCCAAAATAAACATTCAACTTGGAGGCACCTCCCAAACATAAATAACAAAATGATGTTCAACCAACAGTGTTTAGTGGTTTAGGACCAGAAAATAGCAAAATATTGACCGTTATTTACGTATTTATATAGATCTCGGGACTGTTTGCTTGAATACTTTGATTCAAGAGATTTCTTGTGCATATGGACTTAGTCACAATTatgaaaatatacattttgtatGAAAATATCACAGAGAACTGCTACATAGACAACTGTTCCAGAAAATTAGGCCTAGAGCAATCAAGGGATGTAAACTCTAATGGTCATGACAGGTCAATCATGTTCACAGCAATTATCAAACGATACCTTCCCCTACAAGCAATTTTAGACCATTTGTCAAGTAATTTTAATTAACTTTGTACAACATAAATGTGGTTAGAGTACAATTTCAATTGCAAGAGAATGTGTAAAGCAATAATTACTTCTGATGTAGTCACAGCCATATCTAAGCCCTTTTCACAACAGCAAACCTCAACAGATGTGATATTGTTTTATTGGAGCGGTCTTCCTTActactccaaacataacaaaaATAATGAGAAAGATTGTTGCCATAATCATTATCTTCATGGCAACTAGTCAGGTAACAAGCATGTATCATTGATACCAAAGAAGTTTGCTTTTGAACCCAAATCAGAGAAATACCTCCACACCAGATTAGTGAGTTTGTC
>TU844756
TCTTTGATGATATATTCTTATTTTTAGACCTTCTCAAACTAGAACCCCTAAATCTGAGTAAAACTTCTCCAAAATAAACATTCAACTTGGAGGCACCTCCCAAACATAAATAACAAAATGATGTTCAACCAACAGTGTTTAGTGGTTTAGGACCAGAAAATAGCAAAATATTGACCGTTATTTACGTATTTATATAGATCTCGGGACTGTTTGCTTGAATACTTTGATTCAAGAGATTTCTTGTGCATATGGACTTAGTCACAATTatgaaaatatacattttgtatGAAAATATCACAGAGAACTGCTACATAGACAACTGTTCCAGAAAATTAGGCCTAGAGCAATCAAGGGATGTAAACTCTAATGGTCATGACAGGTCAATCATGTTCACAGCAATTATCAAACGATACCTTCCCCTACAAGCAATTTTAGACCATTTGTCAAGTAATTTTAATTAACTTTGTACAACATAAATGTGGTTAGAGTACAATTTCAATTGCAAGAGAATGTGTAAAGCAATAATTACTTCTGATGTAGTCACAGCCATATCTAAGCCCTTTTCACAACAGCAAACCTCAACAGATGTGATATTGTTTTATTGGAGCGGTCTTCCTTActactccaaacataacaaaaATAATGAGAAAGATTGTTGCCATAATCATTATCTTCATGGCAACTAGTCAGGTAACAAGCATGTATCATTGATACCAAAGAAGTTTGCTTTTGAACCCAAATCAGAGAAATACCTCCACACCAGATTAGTGAGTTTGTCCCCAACATGCCATCTATTTACACAATTTCTACAATTCCAAATCCCAAGTTAATTCCATGGGTGCATGAGTTCTACTGTTCTATTTCCCAGAACTGCTTACTGAAGCTTGAATAACCAGGCTTGCCTAAGTGCCTGGAACTTGTATGGCACTGCAATGGGcctggagggagaggtggataaCACCCATGCAGGTCAGATGGTCGGTCAGTCACTACCGGGGCAGGTCTTGGCATGTTGACCTGAGCAGGGCAAAGCATTAAGGAAGCCAAATGGAACTCTAACTCATCaggctctatctctctctggctcctgGACACAACAGCTTAGCATTGACAATGATTAAGTGCAGCACATTGGGATTTGAAAGAGAGAAAATAATTCAATAATTTTAATACATTAAAATGATTTAATGTACTGTACCTTAAAATGTATCTTGACTTGGGACAGCTGTGGCATTATGCGGACTGAAATAAGGGTCTGCGACACTAaaatagtgtttgtgtttagttttTGAAATAAGTGTCATATAAATGTATCTGAATCACAGTCCCATCTCCATTATTTGCATTAGATAATGGATATAATCTGAACTCGAACCCAGTGAAAGATAGCTTTGATTTATTTAGAGTAGCCTTAGGGTTTTTTATACAGAAGTGAGAAAAACACATCATTGACGTTATGCTGTTCAAAAGAGTTTGAGAGTGATTGGCAAGGAACAATCTGAAAATAAATTAGCCTTAAGACATTTATACAAATGAAAAGCTCTTAGGGTGACATTTTGACAACTCATAAAAGTAGTGCTGATGACAAACCAAAGAGTATCACTTCCTTATTTAACAGTATAATT
>TU844758
GGGACAGCTGTGGCATTATGCGGACTGAAATAAGGGTCTGCGACACTAaaatagtgtttgtgtttagttttTGAAATAAGTGTCATATAAATGTATCTGAATCACAGTCCCATCTCCATTATTTGCATTAGATAATGGATATAATCTGAACTCGAACCCAGTGAAAGATAGCTTTGATTTATTTAGAGTAGCCTTAGGGTTTTTTATACAGAAGTGAGAAAAACACATCATTGACGTTATGCTGTTCAAAAGAGTTTGAGAGTGATTGGCAAGGAACAATCTGAAAATAAATTAGCCTTAAGACATTTATACAAATGAAAAGCTCTTAGGGTGACATTTTGACAACTCATAAAAGTAGTGCTGATGACAAACCAAAGAGTATCACTTCCTTATTTAACAGTATAATTATTACATCTTTCTAATCTCATCTCAAACTTGGTGTGCAACAGACACAGAATGCAATTGCATCCCGTGCCTGCACTGTTAAAGCACAATCCTGCTTAAATTATCTCTGCCCTCTCATAGATATCAAATAATGAAGGGTTATGGATATAAATACcactagtacagtacagtgctggGAGTGATTAGGGTCTCTTTTGACACTAACACTGATTTTGTTTTGCCTCATCAGCATCCAGCACGGGGCCTTGAAAGGTCAACCTTCCTGACCTATTAAAATATAACCTGATGTACTATAGTATGATAACAGCTCTTGATGCAATGGCAGTACAACTTAGACTCTGCAATTACTTCACAATGTTCATTTGGAGAGGCAACCTTGCCCATCTGTTTTGAATGGTCCTGACTTCTGTGTTACGTCCTAGGACGTCATGTTACGGTATTATAATCTGGAAATCCTAATGGTCTCTTTCTCAAagtgctctgtctctgtctttatgcagaagggaaaataaataaagcaAATGGACAACATTTATGGAGAGATGCCTTAAGACAAGTGTCTTCCCTAGAAAAGGGACGTTTCCAAAGGCGACCTTTGAACTTGGTGATCTAGGTCAAACAGCTGTTGTCTGTTTTATACTGTGGAAGCTGATCCTGGTGGGTGACGTGGGGATGGACATGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU844757 False 894 lncRNA 0.33 1 72350840 72351733
TU844756 False 1625 lncRNA 0.36 1 72350956 72352580
TU844758 True 1089 lncRNA 0.39 1 72352174 72353262

Neighbor

gene id symbol gene type direction distance location
LOC110530496 LOC100136504 coding upstream 5186 72341496 ~ 72345654 (+)
LOC110529137 LOC106569331 coding upstream 131393 72191167 ~ 72219447 (+)
LOC110530494 LOC106569334 coding upstream 195410 72146353 ~ 72155430 (+)
LOC110530489 iba57 coding upstream 248320 72097392 ~ 72103866 (+)
wnt9a wnt9a coding upstream 416979 71907559 ~ 71934937 (+)
LOC110530498 LOC106569327 coding downstream 140783 72494045 ~ 72496970 (+)
LOC118965654 NA coding downstream 148047 72501309 ~ 72501364 (+)
LOC110530499 aqp1 coding downstream 154436 72507698 ~ 72510508 (+)
LOC110530976 LOC106569323 coding downstream 188793 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 coding downstream 280976 72634238 ~ 72714065 (+)
G744128 NA non-coding upstream 25939 72324167 ~ 72324901 (+)
G744017 NA non-coding upstream 98811 72251712 ~ 72252029 (+)
G744006 NA non-coding upstream 110848 72239287 ~ 72239992 (+)
G743860 NA non-coding upstream 140004 72210503 ~ 72210836 (+)
G743859 NA non-coding upstream 141003 72209637 ~ 72209837 (+)
G744149 NA non-coding downstream 1551 72354813 ~ 72355257 (+)
G744152 NA non-coding downstream 3897 72357159 ~ 72357436 (+)
G744264 NA non-coding downstream 158124 72511386 ~ 72511590 (+)
G744267 NA non-coding downstream 159604 72512866 ~ 72513246 (+)
G742860 NA other upstream 635224 71695602 ~ 71715616 (+)
G742095 NA other upstream 1724096 70626221 ~ 70626744 (+)
G740827 ripk1 other upstream 2812564 69536400 ~ 69538276 (+)
G739708 NA other upstream 3345724 69004337 ~ 69005116 (+)
G739670 NA other upstream 3443875 68903365 ~ 68906965 (+)
LOC110530507 LOC106569317 other downstream 507146 72779485 ~ 72872336 (+)
G744696 NA other downstream 508994 72862256 ~ 72864703 (+)
G744697 NA other downstream 513839 72867101 ~ 72868382 (+)

Expression


Co-expression Network