G744608


Basic Information

Item Value
gene id G744608
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 72695048 ~ 72720467 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU845253
CAACGACAAAAGCATGTTTTCCAAATTCAAATGTTCACAGTCCACATACTGcagccttggtttctcaaatgactgcctcacctggttcgccaactacttctcagacagagttcagtgtgtcaaatcagagagcctgttgtccggacctctggcagtctctatggggataccacagggttcaattctcggaccgactcttttctctgtatatataaacgatgtcgctctcgctgcgggtgattccctgatccacctaaaatctagaatcggcttcctatttcgcaacaaagcctccttcactcacgccgccaaacatacccttgtaaaactgactatcctaccaatcctcggcgatactccaatactctactcagcaaactggatgcaatcTAACACAGtgtcatctgttttgtcaccaaagccccttataccacccaccactgcaacctgtacgctctagtcggctggccctcgctacatattcgtcgccagacccactggctccaggtcatataagtctatgctaggtaaagctctgccttatctcagctcactggtcacgataacaatacccacccgtagcacgcgctccagcagatatatctcactggtcatccccaaagccaacacctcattcggccgcctttccttccatttatctgctaccaatgactgtaacgaattgcaaaaatcgctgaagctggagacttatatttctcTCACTAaatttaaacatcagctatctgagtaGCTAACAGATCGCTGCAGCTTTACATAGCCCATTTGCAAATAGCACACCCAatctaactacctcatcccaatattgtttttatttacttttctgctcttttgaacaccagcatttctacttgcacatcaccatctgcactccagtgttaatttgcaaAATTTTTATTACTTctctactatggcctatttatttccttacctcctcaagccatttgcacacactgtatatagactttctcttatatagactttctcttttttctattgtgatattgactgtacgcttgtttattttatgtgtaactctgtgttgttgattgtgtcgcactgctttgctttaccttgttcaggtcgcagttgtaaatgagaacttgttctcaactagcctacctggttaaataaaggtgaaataaaaa
>TU845250
TGGGTCGCATAATCTCTAGAAAGAAACATACATGCACACAACAGATGATGCTTCAATGAAGATTGTGAGAAGCAAATTGTATAACTTACATGCTCATCTAATTATCTACAAACAAGACACATTTTATGGGTCAAAAGGGCTtgataataaatcaataaatctGATTAATCAATCAACACTGTCATTACTGACAATGTAATCTATATTTTTTGGTGTCTTTGTTCACCATTTACCCTTTACAGTGTTGATGACAATGGTCAATACTTTTTATTTTGCTGCTGGCAAGTTGTATAGTGCAAGTTCACATTTCCTCCCCCCTAGAATTTCAATAGAATTTCAATAGATAACACTCAAGATCTCTTGGTCTTGTGCAAAGCCTTCAGCGATGGTTTTCAGAAGAGGATACAATCAAAAttactacacttcaatatgattATCAGTCCAAAATAAGAACCTCTCATGTAAAGGACATGATTTTCATTTTAAATAAAGAATATCCAACATGAGAAATGAGAGGGAACAAACACAGGGTAAGAAGAATGAATCTTAAATAGATTCGTTGTGCCTTGCCAGGCAAACACAGAATGCAGACAAATACATTATCATGACACCAAAACATAACTGATAAAAGTGACAATACTAAAATGGTCAGAAACCCTCTGTGAGTTGTAATAGGGTTTAtttaatatattaataatgtaaaCAAAGCTTTTAACAACAGACAATAGTCCTAAAATTCAACCATTTCCTAAACTCAACCCCAACCAGACAAATTCTCTCCCTAGCTTTGGTCTATTGCCATTGTAAGACTTACTATAATATTACTGTAAATTAGTGAGGATTGAGTGATTGATCTATGTAACAACATCATTTAATAAGGCATATTCTTTGGATGACCCTGTGCAATAACATATAAAAACATTCCTACCTGTGTCCAACTGACCTAGTCATCTGATAGTGACTCTACACACCCATTCACTGATTATCCATAGTTTCATGAGAAAACCTGCAACTGTAAGTGATTTGACTGAATTAATTTAGGTATATGGGTGGAGGCCTAAGCCATCTATACAATGAAGCACATAAATATAACACTGAGTAATATTACAATCAGACCACAGGAACATTCAATAGCAAGATAGAGAAAGAACAAACTTTCCCTGCCACCTCTAACATCTAGTAGTGAGAGCTACTGGGATATATgcatcagctgggctggacaatctggaccctctctttctaaaattatccgccgccattgttgcaacccctattaccagtctgttcaacctctctttcgtatcgtccgagatccctaaagattggaaaactgccgtggtcatccccctcttcaaaggaggtgacactctagacccaaactgttacagatctatatccatcctgccctgcctttttaaagtcttcgaaagccaagttaataatcagatcactgaccatttcgaatcccaccgtaccttctccgctgtgcaatccggttttcgagctggtcacgggtgcacctcagccacgctcaaggtactaaacgatatcataaccaccatcaataaaagacagtactgtgcagccgtcttcatcgacctggccaaggctttcgactctgtcaatcacagtattcttatcggcagactcaacagccttggtttctcaaatgactgcctcacctggttcgccaactacttctcagacagagttcagtgtgtcaaatcagagagcctgttgtccggacctctggcagtctctatggggataccacagggttcaattctcggaccgactcttttctctgtatatataaacgatgtcgctctcgctgcgggtgattccctgatccacctaaaatctagaatcggcttcctatttcgcaacaaagcctccttcactcacgccgccaaacatacccttgtaaaactgactatcctaccaatcctcggcgatactccaatactctactcagcaaactggatgcaatcTAACACAGtgtcatctgttttgtcaccaaagccccttataccacccaccactgcaacctgtacgctctagtcggctggccctcgctacatattcgtcgccagacccactggctccaggtcatataagtctatgctaggtaaagctctgccttatctcagctcactggtcacgataacaatacccacccgtagcacgcgctccagcagatatatctcactggtcatccccaaagccaacacctcattcggccgcctttccttccatttatctgctaccaatgactgtaacgaattgcaaaaatcgctgaagctggagacttatatttctcTCACTAaatttaaacatcagctatctgagtaGCTAACAGATCGCTGCAGCTTTACATAGCCCATTTGCAAATAGCACACCCAatctaactacctcatcccaatattgtttttatttacttttctgctcttttgaacaccagcatttctacttgcacatcaccatctgcactccagtgttaatttgcaaAATTTTTATTACTTctctactatggcctatttatttccttacctcctcaagccatttgcacacactgtatatagactttctcttatatagactttctcttttttctattgtgatattgactgtacgcttgtttattttatgtgtaactctgtgttgttgattgtgtcgcactgctttgctttaccttgttcaggtcgcagttgtaaatgagaacttgttctcaactagcttacctggttaaataaaggtgtaataaaaaatacaaaaaataaatcaACTGCATAACATGAAATATAATTATACTATTTATCTAAGTATCAGCCCTTTAGAGCTAGCTGATTGTTCAACAGGTCTCGTCCTGCTCTCCCTCACTCCTTTTGAGTGGCTCAGTTAAACTAAGAGGGACAACATGTTACATTATGAAGGAACAAGAGCAACAGGATCCCTTGCAGTGGCTTGCCAGTCAAATGGAACCTGACTGGACAATATACAGTGGCTCGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU845253 False 1166 TUCP 0.43 3 72695048 72720467
TU845250 True 3010 lncRNA 0.40 2 72717336 72720374

Neighbor

gene id symbol gene type direction distance location
LOC110530505 NA coding downstream 77982 72637713 ~ 72639354 (-)
LOC110530503 LOC106569322 coding downstream 83313 72563302 ~ 72634023 (-)
LOC110530500 LOC106569325 coding downstream 154863 72555633 ~ 72562473 (-)
LOC110530497 LOC106569328 coding downstream 300811 72350135 ~ 72416525 (-)
LOC110530495 LOC106569329 coding downstream 409121 72237331 ~ 72308215 (-)
LOC110530506 LOC106569320 coding upstream 10211 72730585 ~ 72772383 (-)
npc1 LOC106569313 coding upstream 264473 72984847 ~ 73015471 (-)
LOC110530977 LOC106569312 coding upstream 295227 73015601 ~ 73104694 (-)
LOC110530512 LOC106569356 coding upstream 467584 73187958 ~ 73191214 (-)
LOC110530513 alat2 coding upstream 478769 73199143 ~ 73216938 (-)
G744593 NA non-coding downstream 17183 72681984 ~ 72700153 (-)
G744572 NA non-coding downstream 74134 72642457 ~ 72643202 (-)
G744521 NA non-coding downstream 190434 72526692 ~ 72526902 (-)
G744511 NA non-coding downstream 205853 72511149 ~ 72511483 (-)
G744747 NA non-coding upstream 77364 72797738 ~ 72798961 (-)
G744787 NA non-coding upstream 157942 72878316 ~ 72878550 (-)
G744790 NA non-coding upstream 161098 72881472 ~ 72881799 (-)
G744797 LOC100846954 non-coding upstream 165215 72885589 ~ 72885879 (-)
G744921 NA non-coding upstream 175921 72896295 ~ 72898162 (-)
G744129 NA other downstream 392344 72324192 ~ 72324992 (-)
G743961 NA other downstream 539469 72177584 ~ 72177867 (-)
G743450 NA other downstream 1001711 71685190 ~ 71715625 (-)
G743447 NA other downstream 1037059 71678685 ~ 71682299 (-)
G743421 NA other downstream 1041551 71675445 ~ 71675785 (-)
G745300 NA other upstream 660927 73381301 ~ 73381701 (-)
G745292 c8 other upstream 665278 73385652 ~ 73391433 (-)
LOC110530984 NA other upstream 1222891 73939248 ~ 73944430 (-)
G746434 NA other upstream 1622255 74342629 ~ 74359974 (-)
G746730 NA other upstream 2119357 74839731 ~ 74840090 (-)
G744436 NA non-coding downstream 212891 72408966 ~ 72482157 (-)

Expression

G744608 Expression in all Baseline Samples

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G744608 Expression in each Bioproject

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G744608 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 75.
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Co-expression Network