G744625


Basic Information

Item Value
gene id G744625
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 72729708 ~ 72730086 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU845270
ctatttagctagcttgctgttgctagctaacatgtcctgggatataaacattgagttgttattttacttgaaatgcacaaggtcctctactccgacaattaatccacacataaaactgtCAATGGAATCGTTTCTagacatctctcctccttccaggctttttcatctttgaacttatggcgattggcatctaaactttcatagtattactacACCGACCGGCAACACAGTTCGTtgttcaatcacccacgtgggtataaccaatgaggagatggcacgtgggtacctgcttctataaaccaatgaggagatgggagaggcaggacttgcagtgcgctctgcgtcagaaatagaaaggacttctattttagcccttggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU845270 True 379 lncRNA 0.43 1 72729708 72730086

Neighbor

gene id symbol gene type direction distance location
LOC110530502 LOC106569321 coding upstream 15643 72634238 ~ 72714065 (+)
LOC110530976 LOC106569323 coding upstream 174423 72542055 ~ 72555556 (+)
LOC110530499 aqp1 coding upstream 219200 72507698 ~ 72510508 (+)
LOC118965654 NA coding upstream 228344 72501309 ~ 72501364 (+)
LOC110530498 LOC106569327 coding upstream 232738 72494045 ~ 72496970 (+)
LOC110530507 LOC106569317 coding downstream 49399 72779485 ~ 72872336 (+)
LOC110530508 LOC106569316 coding downstream 171132 72901218 ~ 72909612 (+)
LOC110530509 cables1 coding downstream 221116 72951202 ~ 72975991 (+)
mmp16b LOC106569311 coding downstream 390743 73120829 ~ 73162119 (+)
LOC110530978 NA coding downstream 452084 73182170 ~ 73187819 (+)
G744267 NA non-coding upstream 216462 72512866 ~ 72513246 (+)
G744264 NA non-coding upstream 218118 72511386 ~ 72511590 (+)
G744152 NA non-coding upstream 372272 72357159 ~ 72357436 (+)
G744668 NA non-coding downstream 67655 72797741 ~ 72798967 (+)
G744698 NA non-coding downstream 142613 72872699 ~ 72873138 (+)
G744795 NA non-coding downstream 154295 72884381 ~ 72884637 (+)
G744796 NA non-coding downstream 155181 72885267 ~ 72885548 (+)
G744806 NA non-coding downstream 157786 72887872 ~ 72888104 (+)
G742860 NA other upstream 1014092 71695602 ~ 71715616 (+)
G742095 NA other upstream 2102964 70626221 ~ 70626744 (+)
G740827 ripk1 other upstream 3191432 69536400 ~ 69538276 (+)
G744696 NA other downstream 132170 72862256 ~ 72864703 (+)
G744697 NA other downstream 137015 72867101 ~ 72868382 (+)
G745083 NA other downstream 519338 73249424 ~ 73250496 (+)
G745410 LOC106569417 other downstream 863551 73593637 ~ 73595238 (+)

Expression


Co-expression Network