G744839


Basic Information

Item Value
gene id G744839
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 72952677 ~ 72952885 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU845503
CGGTCACCCATGCAGATTTGTCCCCATAACCGGTTGGGAGGACTTTACAAAGCTGCCCTGCACCTGCTGCCCTGCACCTGCTGCCTTGCCCTCTCCTATGCAATATAAACAACCTGTAACCCAGTACTCCTCAACACATCGGACCATGGACACCTTTAATACCTTTGTTTACTCTGTAGAGTGGACCAGAGCACAGGGAACATCTGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU845503 True 209 lncRNA 0.52 1 72952677 72952885

Neighbor

gene id symbol gene type direction distance location
LOC110530508 LOC106569316 coding upstream 43065 72901218 ~ 72909612 (+)
LOC110530507 LOC106569317 coding upstream 80341 72779485 ~ 72872336 (+)
LOC110530502 LOC106569321 coding upstream 238612 72634238 ~ 72714065 (+)
LOC110530976 LOC106569323 coding upstream 397392 72542055 ~ 72555556 (+)
LOC110530499 aqp1 coding upstream 442169 72507698 ~ 72510508 (+)
mmp16b LOC106569311 coding downstream 167944 73120829 ~ 73162119 (+)
LOC110530978 NA coding downstream 229285 73182170 ~ 73187819 (+)
samd13 LOC106569309 coding downstream 271286 73224171 ~ 73227167 (+)
LOC110530979 LOC106569355 coding downstream 334366 73287251 ~ 73290541 (+)
LOC110530519 NA coding downstream 361106 73313991 ~ 73320557 (+)
G744829 NA non-coding upstream 24240 72928082 ~ 72928437 (+)
G744818 NA non-coding upstream 51657 72900721 ~ 72901020 (+)
G744817 NA non-coding upstream 52718 72899660 ~ 72899959 (+)
G744806 NA non-coding upstream 64573 72887872 ~ 72888104 (+)
G744796 NA non-coding upstream 67129 72885267 ~ 72885548 (+)
LOC110530509 cables1 non-coding downstream 2848 72951202 ~ 72975991 (+)
G744801 NA non-coding downstream 11437 72964322 ~ 72964612 (+)
G744800 NA non-coding downstream 24571 72977456 ~ 72979123 (+)
G744846 NA non-coding downstream 31406 72984291 ~ 72987041 (+)
G744849 NA non-coding downstream 40633 72993518 ~ 72993937 (+)
G744697 NA other upstream 84295 72867101 ~ 72868382 (+)
G744696 NA other upstream 87974 72862256 ~ 72864703 (+)
G745083 NA other downstream 296539 73249424 ~ 73250496 (+)
G745410 LOC106569417 other downstream 640752 73593637 ~ 73595238 (+)
G745489 NA other downstream 766831 73719716 ~ 73720650 (+)
G746052 NA other downstream 1999800 74952685 ~ 74953842 (+)
nedd8 nedd8 other downstream 2061759 75014644 ~ 75033896 (+)

Expression


Co-expression Network