XLOC_002641 (si:busm1-57f23.1)


Basic Information

Item Value
gene id XLOC_002641
gene name si:busm1-57f23.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 13236100 ~ 13239367 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004912
cacttgACTCAATTGCGGAGTGCGGACTGTGTGTTTTCCACCCTGACTCACCGTCTGTGTTGATTCACTGTCGGGTTTGGGCGTTGACGGAGCTCCGCCCGGGGGAAGGGCGCTTTTGGAGCCGCGGGGTGCGTCAAGATCTTTAGGACTGTGTTTCCAAAAGCGGCCACATATTCACAGAGAACCTCATTCTGCCGGACACACGCAGCTGGAGACATGGACATCTACCTGCTTCTCTTGGTGTCTTTTCTCCCTTTGTTTCACTTGAGCAGAGCTGACCAGCCTCTGGAGGAGGCGGTAGTTGTAGCAAGAAATGTGGAGCTGCTTGGTGGATGGACTGATGCCAATCCGGACAGAGAAGATGTTCAAGACGCAGCGAAAGAAGCTGTAGAGCAATTTAACAGCAAGCCCAGAGCAAAGAAATACTTCAAACTCATTAAGATCACATCAGCTAGCACTCAGGTTACAAATAGGATAAACTACAAAATAGAGGCCATTATTGGAAAAACGAAATGCCACAAATCGGAAGGTGTAAACATTGAGACTTGTCTCATGGCAAAAAagcAACTGACATGCAAGTTTGAGGTCACCATGGACCCAATGAATGATGACCATGAGGTGCACAAAATGATCTGCAAAAGATCCGCTTGAATTTCACTTTAACAACAAATTGATACTGTATAGTTTTGCACTTTTGGATATTGATGACCCATTGTTTTGCTAGCATTTTTGTGATATATCCAGTAGCTTCTGTATAATTTTTGTAAGATTATACAACATGGATTGAAATAATCttcttttaaaagcaatttaatattttgtttagaacccacttttatttattttttaataaaatgtcttCAGATTCATGAAGTGACATCAGTATTCctaaactattaaaaaacaagTTACGTAATGACTTAATTATAAGTGATTTTATGTGCTGCATTTTGCCCAGAATAAACTGACAGACATTTTCCAGAAAGCTAC

Function

symbol description
si:busm1-57f23.1 Predicted to enable cysteine-type endopeptidase inhibitor activity. Predicted to be active in extracellular space. Is expressed in chordo neural hinge; eye; immature eye; and notochord.

GO:

id name namespace
GO:0005615 extracellular space cellular_component
GO:0004869 cysteine-type endopeptidase inhibitor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030616-512 Predicted to enable cysteine-type endopeptidase inhibitor activity. Predicted to be active in extracellular space. Is expressed in chordo neural hinge; eye; immature eye; and notochord.

Ensembl:

ensembl_id ENSDARG00000074425

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004912 True 990 mRNA 0.41 4 13236100 13239367

Neighbor

gene id symbol gene type direction distance location
XLOC_002640 musk coding downstream 57023 13080092 ~ 13179077 (-)
XLOC_002639 CT990561.2 coding downstream 583588 12648430 ~ 12652512 (-)
XLOC_002638 NA coding downstream 1337525 11895373 ~ 11898575 (-)
XLOC_002637 trim23 coding downstream 1395747 11790881 ~ 11840353 (-)
XLOC_002636 adamts6 coding downstream 1471661 11593998 ~ 11764439 (-)
XLOC_002642 NA coding upstream 59472 13298839 ~ 13301973 (-)
XLOC_002643 CR759894.1 coding upstream 65698 13305065 ~ 13305183 (-)
XLOC_002644 il11ra coding upstream 66243 13305610 ~ 13396720 (-)
XLOC_002645 cntfr coding upstream 220763 13460130 ~ 13772861 (-)
XLOC_002646 BX293994.2 coding upstream 367660 13607027 ~ 13607143 (-)
XLOC_002626 NA non-coding downstream 2448451 10784334 ~ 10787649 (-)
XLOC_002625 NA non-coding downstream 2521873 10712178 ~ 10714227 (-)
XLOC_002623 BX323065.1 non-coding downstream 2903673 10319308 ~ 10332427 (-)
XLOC_002622 NA non-coding downstream 2957567 10273729 ~ 10278533 (-)
XLOC_002647 BX293994.1 non-coding upstream 372766 13612133 ~ 13612248 (-)
XLOC_002648 BX000705.1 non-coding upstream 692202 13931569 ~ 13931696 (-)

Expression


Co-expression Network