G745410 (LOC106569417)


Basic Information

Item Value
gene id G745410
gene name LOC106569417
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 73593637 ~ 73595238 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU846133
ACCTGCATTTATTCATATGATAAATATATTAACGATTTACATTTAAGTGACATTTGCATGAAATTTCATGTGTCCAACCATGTTTTCAACTTCAGAAAATGAGAACCAATCTTGAAACAGGAAAAACCTGCTGTTTCTATGAAATGAACATGACCAGCACTAGTACTAGCACTAGTAAAAGCAAATTCTAACTTAGATTTTCCTTTCATGGAATTGTATTCCTTTAGCCCATCCTTGACATTGGCTATTATTTGTAGTTTTGATTGTTACATTGTGCACCTTTAAAGGAGAACTTTTCTTTTTTACCAAATCTGTATTTTGAATGTAAATGGGATGTTATAGAAGTGCCCAGACATTATTTTTTTTGCGATTTCACTTGTTTTTGATAAACTTACCCCAACCAGAGATAGACTTCCTCCTGCTCATTCTGCAGTGCCAGGGTGGGGATAAAGTAAAACAAAAGCTCTAAAATCACCCAAATACATCCTTTTAGAAACGGCAACGCTCTCActatagtgatgcaggtcttcAGATGTTGTACACATTACCTTTTGTCACACCAAACTTTATTGGAAACATATTTCATATTGTGCGTCTCGAGCGATATTTCTCCGTGTAGCCCATGATACTTTTCTGGGTGCGCATGCTCGGGCTACACGGAAAATAAGCACAGATGGATAGGGGAAACTGCTTGAGTCGCACAAAATTAAATATAACATTGCAGATAAAAGTTTGGAAAGATGATTTCAGAAGTTGCGTTTCTAAAATGACGTATTTAGGCTTTTGTCCATGTTTTATTCTAGAACATGCCATTTACATCCAAAATACAGATTTGGttaaaaaaagttagcttatctTTTAAGGATGTCATTATTAACCTCATAACAAAGAGCCTGACAAAAGGTTTGACAGAGAACATGGACAGAACATGCTGGTTAGGAGGTGGAAGAAGAGGGATTGTCTCATTTGTGTACTAGCCTAAAGCCTCCTATGTATACAGAGATAACAACAACCCTCCTTTCAGAGGATGAGTGTTCCAGAGTCTGAAGGAGGAGCAGTCTGTGTCAGACAGGACCTCAGAGCGCCATCACTCCCAGCCTCCCTGCAGCTAGCTCTTTTTCCCCCCCGATGAGGTCCTGCAGGGTAAGGATGGTGGGTGTCGTTTCGCTCCTGTCTCTCCGCGGGCCCTGCAGGAGATCCACGCGCCCAGGCTTGAAAGCCAGCTTCTCTGCCCTGCTCCTGGGCGGGGGCAGGCCGTCACAGAGGCGCGTGCAGGTGGCAGCAGCGAGGCCGCAGAAGGAGGGCTCGTCTGACTGGGAGGAGCCCTCGGAGCTGCCCTCAGAGGGGGGGTCCCTGAAGGCAGGGTGGCGGAGATGCCCCGTGCGGGGTAGAGGGTCTATGGTGCCACGGTCGTTATATATGGGCGCTCGGTTAGCAAGCAAAGGAGAACAGAAAGCAGTGCTCTTCA

Function

NR:

description
SUN domain-containing ossification factor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU846133 True 1468 TUCP 0.44 2 73593637 73595238

Neighbor

gene id symbol gene type direction distance location
c8a c8 coding upstream 202220 73385749 ~ 73391417 (+)
LOC110530520 lexm coding upstream 258803 73325167 ~ 73334834 (+)
LOC110530519 NA coding upstream 273080 73313991 ~ 73320557 (+)
LOC110530979 LOC106569355 coding upstream 303096 73287251 ~ 73290541 (+)
samd13 LOC106569309 coding upstream 366470 73224171 ~ 73227167 (+)
LOC110530527 LOC106569415 coding downstream 97062 73692300 ~ 73696186 (+)
LOC110530528 NA coding downstream 107172 73702410 ~ 73704583 (+)
LOC110530529 prdx6 coding downstream 110588 73705826 ~ 73719262 (+)
LOC110530532 LOC106569413 coding downstream 139589 73734827 ~ 73736698 (+)
LOC110530531 LOC106569411 coding downstream 158775 73754013 ~ 73761732 (+)
G745379 NA non-coding upstream 109051 73484348 ~ 73484586 (+)
G745325 NA non-coding upstream 149961 73442724 ~ 73443676 (+)
G745305 NA non-coding upstream 193675 73397908 ~ 73399962 (+)
G745304 NA non-coding upstream 196135 73396993 ~ 73397502 (+)
G745291 NA non-coding upstream 197219 73394891 ~ 73396418 (+)
G745426 LOC106569417 non-coding downstream 4746 73599984 ~ 73604429 (+)
G745428 LOC106569417 non-coding downstream 11661 73606899 ~ 73607383 (+)
G745497 NA non-coding downstream 153915 73749153 ~ 73749581 (+)
G745499 NA non-coding downstream 155914 73751152 ~ 73751462 (+)
G745083 NA other upstream 343141 73249424 ~ 73250496 (+)
LOC110530507 LOC106569317 other upstream 721333 72779485 ~ 72872336 (+)
G744697 NA other upstream 725255 72867101 ~ 72868382 (+)
G744696 NA other upstream 728934 72862256 ~ 72864703 (+)
LOC110530502 LOC106569321 other upstream 950899 72634238 ~ 72714065 (+)
G745489 NA other downstream 124478 73719716 ~ 73720650 (+)
G746052 NA other downstream 1357447 74952685 ~ 74953842 (+)
nedd8 nedd8 other downstream 1419406 75014644 ~ 75033896 (+)
G746936 NA other downstream 1732534 75327772 ~ 75328195 (+)
LOC110530987 LOC106569478 other downstream 1754970 75151419 ~ 75357954 (+)

Expression


Co-expression Network