G745426 (LOC106569417)


Basic Information

Item Value
gene id G745426
gene name LOC106569417
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 73599984 ~ 73604429 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU846151
TTGGCTGATCCTATGAGGTCATTTGAAGCCTTGTCCTCTGCAGGAACGTATCCAGGAGGATAATCTGAAGGTCACACAAACACAGGAGAGATAACATCACACTCACCAGGAACAACATCCAAACAGTTCAAAGGTGAGAGGTACAAATTACATTAACCTGTGATGGGTTGGGATTCCTAAATGTTAACTATTGTTAATCCTAAGTTCTACTAGAGACATGAGGGGTGCCATAGTCTAGGGTTAGAGCTTTCATAGTGTCCGTCAATTTCTTACTCTGATATTTAGAACCTAACACCTGTATAAGGACTTTGTTGACATATTACATCTAGTCTCGTCATAAGGTGAACATGTTGCTGTGTACTTGTAACATGTTAATGTACATTGATGAATGCGTCATATCTTATCATGCATTTCCTGTCTGATACGCATGACCAGAGACATTTTATTGATATGTTTATGACCATGATGGTTGAGAGAATTTTGATAAGTATTTCAGATAGTGCAGAAGAACAGGAGGCTCTCACCGAGGTCGTCATCCTGGTCATCTAGTCTGTCCAGGGGGTCAGCGATCTCCTCATACTCCTCCACCATACTCGTTCCAAAAACCCTTATGAGACTAAGGGGGCAGAAGTGTTCAGATCCATGGTGAGAGACCAGCTCCACCTTTATGTACTTGGTGAACATCTTGACATATTTGGCGTACAGGTGCTCGTCCAGAGGGAAACTCTGAACAGTGCGCTCCTCCCGAGCATGAAAAGTGCCCAGCTTCACCCACTTGTTGGTCGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU846151 True 786 lncRNA 0.44 4 73599984 73604429

Neighbor

gene id symbol gene type direction distance location
c8a c8 coding upstream 208567 73385749 ~ 73391417 (+)
LOC110530520 lexm coding upstream 265150 73325167 ~ 73334834 (+)
LOC110530519 NA coding upstream 279427 73313991 ~ 73320557 (+)
LOC110530979 LOC106569355 coding upstream 309443 73287251 ~ 73290541 (+)
samd13 LOC106569309 coding upstream 372817 73224171 ~ 73227167 (+)
LOC110530527 LOC106569415 coding downstream 87871 73692300 ~ 73696186 (+)
LOC110530528 NA coding downstream 97981 73702410 ~ 73704583 (+)
LOC110530529 prdx6 coding downstream 101397 73705826 ~ 73719262 (+)
LOC110530532 LOC106569413 coding downstream 130398 73734827 ~ 73736698 (+)
LOC110530531 LOC106569411 coding downstream 149584 73754013 ~ 73761732 (+)
G745379 NA non-coding upstream 115398 73484348 ~ 73484586 (+)
G745325 NA non-coding upstream 156308 73442724 ~ 73443676 (+)
G745305 NA non-coding upstream 200022 73397908 ~ 73399962 (+)
G745304 NA non-coding upstream 202482 73396993 ~ 73397502 (+)
G745291 NA non-coding upstream 203566 73394891 ~ 73396418 (+)
G745428 LOC106569417 non-coding downstream 2470 73606899 ~ 73607383 (+)
G745497 NA non-coding downstream 144724 73749153 ~ 73749581 (+)
G745499 NA non-coding downstream 146723 73751152 ~ 73751462 (+)
G745500 NA non-coding downstream 148015 73752444 ~ 73752723 (+)
G745410 LOC106569417 other upstream 4746 73593637 ~ 73595238 (+)
G745083 NA other upstream 349488 73249424 ~ 73250496 (+)
LOC110530507 LOC106569317 other upstream 727680 72779485 ~ 72872336 (+)
G744697 NA other upstream 731602 72867101 ~ 72868382 (+)
G744696 NA other upstream 735281 72862256 ~ 72864703 (+)
G745489 NA other downstream 115287 73719716 ~ 73720650 (+)
G746052 NA other downstream 1348256 74952685 ~ 74953842 (+)
nedd8 nedd8 other downstream 1410215 75014644 ~ 75033896 (+)
G746936 NA other downstream 1723343 75327772 ~ 75328195 (+)
LOC110530987 LOC106569478 other downstream 1745779 75151419 ~ 75357954 (+)

Expression


Co-expression Network