XLOC_026413 (BX901883.4)


Basic Information

Item Value
gene id XLOC_026413
gene name BX901883.4
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 29713211 ~ 29717145 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051473
GGTGCTTCAGATAGGTTGAAGGACATGTACAGATAGCATATGGCCGTGTACCTCTGAGTCTTCTGCCTCATCTGAGGAAGATTTGTTATGCTCTACGACCTCACAAGGTGACATTGCTAGGCCAAAGTCAGCAGTCAGTGCAGCCACTGAAGCATGACAGGAAATCAACAGTCTGTGTATGTTGACCTGACTTCAAAACATGGTTCATCTCTTTGAAGGTTTCTTCCGAAAATGGCAATCTGCTGTTGAATATGGTGCCGTCGAAGATCCGGTTAGAGCAGGGAGCATCCAGCAGAACGAGCCGACCATTACTCGTCATAGAGCCGGCTAGAGGAGACCGAGAAGGCGGAGGCGCCGGAACTGCTGTTTTCTACACCCGTCACTGAAGCTCGCTTATCCAAATCCGCGTTGGCTTTCTCGCACCCCGAACCGTCCCGCTTGCAGAGCCCTTGCGCCATGTAAAAGACAAAAACACCTGAGAATGAGGAGCGTGGCGTGCTGGAAAAGGAGGATACGGCTCTGCTTCTGTCCCCTTTGCTTGTGTGCTAGTGAAGATTTGGGAGAGGGATGTAGGCAGGCGTGCTGGGGCTCAggatgagagagagcgagagaaagagagaaagagagagagagagagagagagagagagagagagagagagagagagagagagagaatgagaattACACAACAGAGAAGGGATGTGCGGCGACAGAAAAGGGTGCAGTAAAACTCTTATTTGGACGGAGCGAAACGACACGGATATAAACTAATTTTCCTCAAGAATAGCAGATTTTAATCGATTCTTACATTCTGACTGACTGTACTGGGTTGTACGGACTGCATGTTTTGTGGATTATGTAATCGAGTTACTAAAATCAAGTTGCTTTAATTAGAATAGCCCacgtttcattttaaaatagccAAATTTTCAGACATGACAACGTAAAATCCTTAATTACTAGACGTCTTAAAATATTTGTgcttatttataatttttgaagTATTGTAAGCGAATTTTAAATAGgatttatgtatgttttaaatgttttagacaACAACACTGATCATATTTGTATAGACATTGTATTTTAACCTAATTGCATTTACTGAAACGGCAGAGTACATAACAGCATTTCTAAATGTTTCTatatgtacatatgtgtgtgtgtattttccgAGGTCTTAGTAAGTATACATAATTATCTCTATTcatatcaaataaaatgttttcac

Function

GO:

id name namespace
GO:0008033 tRNA processing biological_process

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097358

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051473 True 1236 lncRNA 0.42 2 29713211 29717145

Neighbor

gene id symbol gene type direction distance location
XLOC_026412 si:ch73-233k15.2 coding downstream 24812 29674308 ~ 29688399 (-)
XLOC_026411 BX571960.2 coding downstream 41558 29654961 ~ 29671653 (-)
XLOC_026410 NA coding downstream 87276 29623117 ~ 29625935 (-)
XLOC_026409 BX571960.1 coding downstream 160449 29552641 ~ 29552762 (-)
XLOC_026408 cyth4a coding downstream 204252 29487300 ~ 29508959 (-)
XLOC_026414 BX901883.6 coding upstream 52997 29770142 ~ 29770258 (-)
XLOC_026415 NA coding upstream 118020 29835165 ~ 29863606 (-)
XLOC_026416 rpl3 coding upstream 150068 29867213 ~ 29871364 (-)
XLOC_026417 BX901883.1 coding upstream 150259 29867404 ~ 29867540 (-)
XLOC_026418 NA coding upstream 151490 29868635 ~ 29868732 (-)
XLOC_026407 NA non-coding downstream 330606 29376613 ~ 29382605 (-)
XLOC_026406 BX005369.2 non-coding downstream 461146 29251949 ~ 29252065 (-)
XLOC_026425 NA non-coding upstream 277750 29994895 ~ 30004929 (-)

Expression


Co-expression Network