G745534


Basic Information

Item Value
gene id G745534
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 73809963 ~ 73811422 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU846277
TTATTGCTGTGGAAGGGTACAGAGTTGGCAGGCCCCCTGAGCCTGTTGAGCAGTTATACCACAGAGGGACCAACTGCATCTGGCCTGCCCTACTACATCAATCAATCATACTGTACATCAATCGTTAATTTGATTAATCAACCTGTGCTTTTTCAGATTCTCATGGTTTTGTGCTGTCAGAATAAATGGGCAAGTTCGTGACAGACACAACCACATCAGAAAGGTACAAAACAGGTACAGAACACTCATTATATACCGTTGTATATGTTTACAATTGTAAGCGTAAGAGATGTTCACTTAATATAAGTTACAGTAGTTGTCTTCTGTCCCGACCCCAGCTTACAGTAAATCTATAGTGTTACTTTTGATTCTATCCAAGGACTTGTTATGAAGAAATAATGAAAAAGTCGGCACCCAGTTCTTAgttggtgtgggtgtgtttgtgtgcgtgtgtattggcggtgaggggggggggggggggggggggggggacatatgtATAGGCAAGGCAGTGAATCTAACTCTTGGCCCTTGCTGGCTCCATATAAGAACACAAACACATGGGTGCATGATGTCATTCCGCCTGCCATACCGCCGTAACCCACGTGACTAGCTAGCTCAGAGAGACAGCTGTGACTGTGTCTAACTCTAAAAACCTGCTCCTTCCTGGATCACATGCTGCTCAACCTCTCACCCACCCAATCAATGAAGCCACAAACAAGACCTGTGTTTTATGTGAGTGCAATATTCAGTGATCAACATAAATGGACCTCTAAGCTATCTTGGAAGAGTCACAGTACCCTGTCCAGTGAATGACGAAGATGGTGTGTAGCTGGATTGGGGtcatagagtgtgtgtgtttgtgcgtgtgtgtgtgtgtgttgaagggaAACTGGTTGAAAAGGGACCGGGTCATTTTGTGGTTTATTAAGACAGGGACCGACGTGGTCATTCCTTGAAATTCCTGCAGGGTTGTCGTGGCGATGTAAGTTAGGGTTATAGCAGGTATTCTGTTGCAACACCCGGCCCTACCCTTCTCCTCTCCAGTGCACCTCGTGCCTGCCCCTACTATTGCCTAACCAGAGAGTTTACCAGAACGTAATGTCCTCATACTGCAGCATATCATGGGTTATACCGCCTGGTATGTGGTTAAAAAGTTAATAAACAAACCTTGGACTGAACATGCATAGTGAATGCATGATCATATAGTGTACTGTAGGGATCATGCAGGTATGGTACTGTAGGCACATACTATGGCTGTTTTATGACATGCAAGTATGACAGCAACCAGAAACCTGTGTTTGAAAATGTGCATTGAGGCATCCAAGCAAGCCTACatgttggggcagcaggtagcctagtgattagagcgttggttACTGGAtccaatccccgagctgacaagttaaaaaaaaTCTGCCCATGAGTAAGGCaattccccggtaggccgtcaccccccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU846277 True 1460 lncRNA 0.46 1 73809963 73811422

Neighbor

gene id symbol gene type direction distance location
si:ch1073-82l19.1 LOC106569408 coding upstream 16143 73770882 ~ 73793820 (+)
LOC110530531 LOC106569411 coding upstream 48231 73754013 ~ 73761732 (+)
LOC110530532 LOC106569413 coding upstream 73265 73734827 ~ 73736698 (+)
LOC110530529 prdx6 coding upstream 90701 73705826 ~ 73719262 (+)
LOC110530528 NA coding upstream 105380 73702410 ~ 73704583 (+)
LOC110530534 LOC106569406 coding downstream 23408 73834830 ~ 73837375 (+)
LOC110530535 LOC106569400 coding downstream 33226 73844648 ~ 73862206 (+)
LOC110530540 LOC106569403 coding downstream 98356 73909778 ~ 73917998 (+)
LOC110530541 ipp coding downstream 112887 73924309 ~ 73931497 (+)
LOC110530543 gpbl1 coding downstream 128672 73940094 ~ 73951207 (+)
G745501 NA non-coding upstream 56098 73753604 ~ 73753865 (+)
G745500 NA non-coding upstream 57240 73752444 ~ 73752723 (+)
G745499 NA non-coding upstream 58501 73751152 ~ 73751462 (+)
G745497 NA non-coding upstream 60382 73749153 ~ 73749581 (+)
G745557 NA non-coding downstream 59008 73870430 ~ 73882450 (+)
G745568 NA non-coding downstream 80216 73891638 ~ 73892041 (+)
G745594 NA non-coding downstream 122073 73933495 ~ 73933754 (+)
G745595 NA non-coding downstream 123886 73935308 ~ 73935597 (+)
G745589 NA non-coding downstream 125087 73936509 ~ 73936859 (+)
G745489 NA other upstream 89313 73719716 ~ 73720650 (+)
G745410 LOC106569417 other upstream 214725 73593637 ~ 73595238 (+)
G745083 NA other upstream 559467 73249424 ~ 73250496 (+)
G744697 NA other upstream 941581 72867101 ~ 72868382 (+)
G744696 NA other upstream 945260 72862256 ~ 72864703 (+)
G746052 NA other downstream 1141263 74952685 ~ 74953842 (+)
nedd8 nedd8 other downstream 1203222 75014644 ~ 75033896 (+)
G746936 NA other downstream 1516350 75327772 ~ 75328195 (+)
LOC110530987 LOC106569478 other downstream 1538786 75151419 ~ 75357954 (+)
G746951 LOC106591969 other downstream 1568080 75379450 ~ 75383243 (+)

Expression


Co-expression Network