G745590


Basic Information

Item Value
gene id G745590
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 73936948 ~ 73937684 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU846340
gctatttaggagcctcttggacctagacttggcgctccggtaccacttgccgtgcggtagcaaagagaacagtctatgactagggtggctggattaTTTGACAatcttttgggccttcctctgacaccgccttgtatagaggtcctggatggcaggaagcttggccccagtgatgtactgggccgtacgcactaccctctgtagtgccttgcggtcggaggccgagcagttgccataccaggcagtgatgcaacccgtcaggatgctctcaatggtgcagctgtaaaaccttttgaggatctgagaacccatgccaaatattttcagtctcctgagggaaataggttttgtcatgccctcttcacgattatcttggtgtgcttggaccatgttaatttgttgttgatgtgcacgccaaggaacttgaagctctcaacctgctccactatagccccgtcgatgagaatgggggcgtgcttggtcctccttttcctgtagtccacaatcatctcctttgtcttgatcacgttgagggagaggttgctgtccttgcaccacacggtcagatctctgacctcctccttataggctgtctcatcgttgtcggtgagcaaacttaatgatggtgttggagtcgtgcctggccatgcagtcatgagtgaataaaaaaaacatatttctaagtttaacaaaccatagaaCTCTATGCACAACTAGtactttgaacaatttacaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU846340 True 737 lncRNA 0.49 1 73936948 73937684

Neighbor

gene id symbol gene type direction distance location
LOC110530541 ipp coding upstream 5451 73924309 ~ 73931497 (+)
LOC110530540 LOC106569403 coding upstream 18950 73909778 ~ 73917998 (+)
LOC110530535 LOC106569400 coding upstream 74742 73844648 ~ 73862206 (+)
LOC110530534 LOC106569406 coding upstream 99573 73834830 ~ 73837375 (+)
si:ch1073-82l19.1 LOC106569408 coding upstream 143128 73770882 ~ 73793820 (+)
LOC110530543 gpbl1 coding downstream 2410 73940094 ~ 73951207 (+)
prdx1 nkef coding downstream 36972 73974656 ~ 73981179 (+)
zte38 LOC106569397 coding downstream 45024 73982708 ~ 73991211 (+)
LOC110530564 LOC106569383 coding downstream 290427 74228111 ~ 74230113 (+)
LOC110530563 LOC106569381 coding downstream 306717 74244401 ~ 74247287 (+)
G745589 NA non-coding upstream 89 73936509 ~ 73936859 (+)
G745595 NA non-coding upstream 1351 73935308 ~ 73935597 (+)
G745594 NA non-coding upstream 3194 73933495 ~ 73933754 (+)
G745568 NA non-coding upstream 44907 73891638 ~ 73892041 (+)
G745557 NA non-coding upstream 54498 73870430 ~ 73882450 (+)
G745585 NA non-coding downstream 656 73938340 ~ 73939164 (+)
G745597 NA non-coding downstream 7344 73945028 ~ 73945294 (+)
G745600 NA non-coding downstream 26326 73964010 ~ 73964227 (+)
G745601 NA non-coding downstream 26721 73964405 ~ 73964631 (+)
G745602 NA non-coding downstream 26979 73964663 ~ 73964945 (+)
G745489 NA other upstream 216298 73719716 ~ 73720650 (+)
G745410 LOC106569417 other upstream 341710 73593637 ~ 73595238 (+)
G745083 NA other upstream 686452 73249424 ~ 73250496 (+)
G744697 NA other upstream 1068566 72867101 ~ 72868382 (+)
G744696 NA other upstream 1072245 72862256 ~ 72864703 (+)
G746052 NA other downstream 1015001 74952685 ~ 74953842 (+)
nedd8 nedd8 other downstream 1076960 75014644 ~ 75033896 (+)
G746936 NA other downstream 1390088 75327772 ~ 75328195 (+)
LOC110530987 LOC106569478 other downstream 1412524 75151419 ~ 75357954 (+)
G746951 LOC106591969 other downstream 1441818 75379450 ~ 75383243 (+)

Expression


Co-expression Network