Gene
RNA
| Item | Value |
|---|---|
| gene id | G745601 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 73964405 ~ 73964631 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tripartite motif-containing protein 16-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU846351 | True | 227 | lncRNA | 0.49 | 1 | 73964405 | 73964631 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530543 | gpbl1 | coding | upstream | 13198 | 73940094 ~ 73951207 (+) |
| LOC110530541 | ipp | coding | upstream | 32908 | 73924309 ~ 73931497 (+) |
| LOC110530540 | LOC106569403 | coding | upstream | 46407 | 73909778 ~ 73917998 (+) |
| LOC110530535 | LOC106569400 | coding | upstream | 102199 | 73844648 ~ 73862206 (+) |
| LOC110530534 | LOC106569406 | coding | upstream | 127030 | 73834830 ~ 73837375 (+) |
| prdx1 | nkef | coding | downstream | 10025 | 73974656 ~ 73981179 (+) |
| zte38 | LOC106569397 | coding | downstream | 18077 | 73982708 ~ 73991211 (+) |
| LOC110530564 | LOC106569383 | coding | downstream | 263480 | 74228111 ~ 74230113 (+) |
| LOC110530563 | LOC106569381 | coding | downstream | 279770 | 74244401 ~ 74247287 (+) |
| LOC118965552 | NA | coding | downstream | 310695 | 74275326 ~ 74279768 (+) |
| G745600 | NA | non-coding | upstream | 178 | 73964010 ~ 73964227 (+) |
| G745597 | NA | non-coding | upstream | 19111 | 73945028 ~ 73945294 (+) |
| G745585 | NA | non-coding | upstream | 25241 | 73938340 ~ 73939164 (+) |
| G745590 | NA | non-coding | upstream | 26721 | 73936948 ~ 73937684 (+) |
| G745589 | NA | non-coding | upstream | 27546 | 73936509 ~ 73936859 (+) |
| G745602 | NA | non-coding | downstream | 32 | 73964663 ~ 73964945 (+) |
| G745604 | NA | non-coding | downstream | 1572 | 73966203 ~ 73966429 (+) |
| G745609 | NA | non-coding | downstream | 17174 | 73981805 ~ 73982592 (+) |
| G745617 | NA | non-coding | downstream | 23846 | 73988477 ~ 73988676 (+) |
| G745489 | NA | other | upstream | 243755 | 73719716 ~ 73720650 (+) |
| G745410 | LOC106569417 | other | upstream | 369167 | 73593637 ~ 73595238 (+) |
| G745083 | NA | other | upstream | 713909 | 73249424 ~ 73250496 (+) |
| G744697 | NA | other | upstream | 1096023 | 72867101 ~ 72868382 (+) |
| G744696 | NA | other | upstream | 1099702 | 72862256 ~ 72864703 (+) |
| G746052 | NA | other | downstream | 988054 | 74952685 ~ 74953842 (+) |
| nedd8 | nedd8 | other | downstream | 1050013 | 75014644 ~ 75033896 (+) |
| G746936 | NA | other | downstream | 1363141 | 75327772 ~ 75328195 (+) |
| LOC110530987 | LOC106569478 | other | downstream | 1385577 | 75151419 ~ 75357954 (+) |
| G746951 | LOC106591969 | other | downstream | 1414871 | 75379450 ~ 75383243 (+) |
