Gene
RNA
| Item | Value |
|---|---|
| gene id | G745737 |
| gene name | tep1 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 74218598 ~ 74219954 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| tep1 | Predicted to enable RNA binding activity. Orthologous to human TEP1 (telomerase associated protein 1). |
| description |
|---|
| telomerase protein component 1 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU846506 | True | 739 | lncRNA | 0.54 | 6 | 74218598 | 74219954 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zte38 | LOC106569397 | coding | upstream | 228683 | 73982708 ~ 73991211 (+) |
| prdx1 | nkef | coding | upstream | 237419 | 73974656 ~ 73981179 (+) |
| LOC110530543 | gpbl1 | coding | upstream | 267391 | 73940094 ~ 73951207 (+) |
| LOC110530541 | ipp | coding | upstream | 287101 | 73924309 ~ 73931497 (+) |
| LOC110530540 | LOC106569403 | coding | upstream | 300600 | 73909778 ~ 73917998 (+) |
| LOC110530564 | LOC106569383 | coding | downstream | 8157 | 74228111 ~ 74230113 (+) |
| LOC110530563 | LOC106569381 | coding | downstream | 24447 | 74244401 ~ 74247287 (+) |
| LOC118965552 | NA | coding | downstream | 55372 | 74275326 ~ 74279768 (+) |
| si:dkeyp-66d1.7 | LOC106569375 | coding | downstream | 148183 | 74368137 ~ 74376776 (+) |
| ftr66 | LOC106569374 | coding | downstream | 156893 | 74376847 ~ 74382998 (+) |
| G745689 | tep1 | non-coding | upstream | 7548 | 74209489 ~ 74211050 (+) |
| G745646 | LOC106600394 | non-coding | upstream | 17889 | 74074951 ~ 74200709 (+) |
| G745655 | LOC106569384 | non-coding | upstream | 103584 | 74105268 ~ 74115014 (+) |
| G745645 | LOC106569384 | non-coding | upstream | 116720 | 74053099 ~ 74101878 (+) |
| G745643 | NA | non-coding | upstream | 166485 | 74051388 ~ 74052113 (+) |
| G745746 | LOC106569380 | non-coding | downstream | 28399 | 74248353 ~ 74249745 (+) |
| G745795 | LOC106569378 | non-coding | downstream | 83152 | 74303106 ~ 74308955 (+) |
| G745796 | NA | non-coding | downstream | 92030 | 74311984 ~ 74312241 (+) |
| G745799 | NA | non-coding | downstream | 93561 | 74313515 ~ 74313778 (+) |
| G745800 | NA | non-coding | downstream | 94620 | 74314574 ~ 74315358 (+) |
| G745489 | NA | other | upstream | 497948 | 73719716 ~ 73720650 (+) |
| G745410 | LOC106569417 | other | upstream | 623360 | 73593637 ~ 73595238 (+) |
| G745083 | NA | other | upstream | 968102 | 73249424 ~ 73250496 (+) |
| G744697 | NA | other | upstream | 1350216 | 72867101 ~ 72868382 (+) |
| G744696 | NA | other | upstream | 1353895 | 72862256 ~ 72864703 (+) |
| G746052 | NA | other | downstream | 732731 | 74952685 ~ 74953842 (+) |
| nedd8 | nedd8 | other | downstream | 794690 | 75014644 ~ 75033896 (+) |
| G746936 | NA | other | downstream | 1107818 | 75327772 ~ 75328195 (+) |
| LOC110530987 | LOC106569478 | other | downstream | 1130254 | 75151419 ~ 75357954 (+) |
| G746951 | LOC106591969 | other | downstream | 1159548 | 75379450 ~ 75383243 (+) |
