G745800



Basic Information


Item Value
gene id G745800
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 74314574 ~ 74315358 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU846577
gagagaataGGGATTATCCTGATCCAGGCCCGGGAAGATACCATCTCACTTACCACCATCagaccaccacaacaacaactccCACCACATGTCCTCAGTCTCATCAAGCAGAAAAGAAAGATCTGGAGAGACTTTATTAGAACAAGAGCACCCAACCTGAAGACAGAAGTTAATCGGTTGCAGAATCACATCAGACACCAACTCACCCTCCACAAACAGAAACAGTGGACAGCCTTCTATCACCTGCTAGATACAGACACCAAACCCCGGACCTTCtggcaaaaaaaaatctaaacaattAATGGAGACAAAACCAATAATATCATACCCGTGCTAAAGTCTCAAAACCAACTAATCGAAGACAATGAACCACCTACAAAATGTTAATTCTTGTCCCAACGATCCTCTCTTTGACAAAGACTGGAAAACCATCGTCGACAGAGAAATACAGAAAACAGTGTACACTTCAAATTCGACACCAGTAGACCATCCCCTCACTCGCTCTGTTAGCGTTGAAGAAATCAAGACTCacttgaaaaaaaacaaaaaacaaagcaCCAGGGGAAGACAACATTGACAGCACACTCATTAAACAAGCACCTGATGAATACCTGCACCTCCTTTCTAACCTCTTCACAGCATGTCTCATGGAAGGCTACTTTCCCCTACCATGGAAATCTGCAGTTGTCACAATGATCCACAAACCGGCAAAGACCCATACAACGTCACAAGTTATAGACCAATCAGCCTCCTCAGTCATGTCgggaagctgtttgagagagtAC

Function


NR:

description
uncharacterized protein LOC111608691

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU846577 True 785 lncRNA 0.44 1 74314574 74315358

Neighbor


gene id symbol gene type direction distance location
LOC118965552 NA coding upstream 34806 74275326 ~ 74279768 (+)
LOC110530563 LOC106569381 coding upstream 67287 74244401 ~ 74247287 (+)
LOC110530564 LOC106569383 coding upstream 84461 74228111 ~ 74230113 (+)
zte38 LOC106569397 coding upstream 324659 73982708 ~ 73991211 (+)
prdx1 nkef coding upstream 333395 73974656 ~ 73981179 (+)
si:dkeyp-66d1.7 LOC106569375 coding downstream 52779 74368137 ~ 74376776 (+)
ftr66 LOC106569374 coding downstream 61489 74376847 ~ 74382998 (+)
ltb4r2b LOC106569372 coding downstream 93027 74408385 ~ 74413205 (+)
sdr39u1 sdr39u1 coding downstream 109089 74424447 ~ 74428142 (+)
parp2 parp2 coding downstream 116386 74431744 ~ 74438581 (+)
G745799 NA non-coding upstream 796 74313515 ~ 74313778 (+)
G745796 NA non-coding upstream 2333 74311984 ~ 74312241 (+)
G745795 LOC106569378 non-coding upstream 5619 74303106 ~ 74308955 (+)
G745746 LOC106569380 non-coding upstream 64829 74248353 ~ 74249745 (+)
G745737 tep1 non-coding upstream 94620 74218598 ~ 74219954 (+)
G745801 NA non-coding downstream 60 74315418 ~ 74315636 (+)
G745803 NA non-coding downstream 2646 74318004 ~ 74318215 (+)
G745804 NA non-coding downstream 4087 74319445 ~ 74319688 (+)
G745764 copa non-coding downstream 7345 74322703 ~ 74325901 (+)
G745810 NA non-coding downstream 29545 74344903 ~ 74347740 (+)
G745489 NA other upstream 593924 73719716 ~ 73720650 (+)
G745410 LOC106569417 other upstream 719336 73593637 ~ 73595238 (+)
G745083 NA other upstream 1064078 73249424 ~ 73250496 (+)
G744697 NA other upstream 1446192 72867101 ~ 72868382 (+)
G744696 NA other upstream 1449871 72862256 ~ 72864703 (+)
G746052 NA other downstream 637327 74952685 ~ 74953842 (+)
nedd8 nedd8 other downstream 699286 75014644 ~ 75033896 (+)
G746936 NA other downstream 1012414 75327772 ~ 75328195 (+)
LOC110530987 LOC106569478 other downstream 1034850 75151419 ~ 75357954 (+)
G746951 LOC106591969 other downstream 1064144 75379450 ~ 75383243 (+)

Expression



Co-expression Network