G745810


Basic Information

Item Value
gene id G745810
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 74344903 ~ 74347740 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU846587
ccatcattactttaagacatggtcggTCAATCcgtaaaatttcaagaactttgaaaaagtttattcaagtgcagttgcaaaacaaaatcaagcactatgatgaaactggctctcatgaggaccgccacaggaaaggaagaccaagagttacatctgcttcagaggataagttcattagagttatcagcctcagaaattacaaaTAAATTCTTCAGAGTTCAAacaacagacatctcaacatcaactgttcagaggagactgcgtgaatcaggccttcatggtcgaattgccgcaaagaacccactactaaaggacaccaattagaagagactggctttggccaagaaacacaagcaatggaaatgtgtcctttggtctggattccaaatgtgagattttttggttccaaccaccatgtctttgtgagacgcagagtaggtgaacagatgatctacgcatgtgtggttcccaccgtgaagtatggaggaggtggtgttatggtggTTTGCTGATGacgctgtcagtgatttatttagaattcaaagcaaacttaaccagcatggctacaacagcattatCCAACGAcacgccatcacatctggtttgcgcttagtgggactatcatgtttttcaacaggacagtgacccaacacacctccaggctgtgtaagggctatttgacaaagaaggagagtgatgagtgctgcatcagatgacctggcctccacaatcacctgacctcaacccaatagaggtttgggataaattggaccgcagattgaaagaaaagtagccaacaagtgctcagcataagactgttggaaaagcattccaggtgaaactggttgagaataccaagtgtgcaaagcttatcaaagcaaagggtggctatttgatatatatatattcgtaTCATTTTGATCACAAGAAAAACAGCAGGGTCACATACCAGTAGTGGTACTGGTTTCGATATAATCATGCGAAACAGTATTCTCTCATCATGGCCCAAATCCAATTTCGACATTGTGGTCACGGTGTCAGAAACCTTTTTTCCATAACTTGTAGTGTATAAAAAGCTAGGAGGGTTATAACCACAGTCACAAAAGAGTCCCACTACTGGACAGACGCCCCGGGATTCAGGGGACCGTCTTAGTCCCGATGGTTACTGACCGACCTTGGCTCTAGCCCCATGCGCAAACCAGAGCACCAACCTCGCTAACCTGTTTAAAAACTTGAATAATGTCAATTATAAATATATGTCACAATTGGCCACAGGACTGGTTCTTACATCTTGTGGATGTAACAATGTTTGAACCGACATCAAGAAAACTAGAGGTCAAATCAAGTGCACAGCCATATACCGTCTCTGGTACAACATAGTAGCTTTTGGGAAGATACTATATAACTAACCAAGGTAAAGTCAGTCTCTAAAAATCAGTTAGCCGTCTTATGATTATGAAATTAGAACGAGGTAAGTTTAACTCCTCGATTTTCTTTAAATAATTCACAAATGTACACTGGTTATGCAACCAACAATATTAATCTACACGCATGTTACATTAACAGTATTAATGATGAAAATGGCAAAATGTATAACTCTAAACGAGTGGTCAGAAACAACCTAATCAACCCCTGGGGTGTTGGTGTTACTTTATTGATTGAGTGGAACTGTGATGGTGGCTCAACACCCTTTGTTGGGCACGCAGCCCCATGATGATACTGCAGCTATGAAACAACTCAATCATCACTCAGCAACTCTCACAACAGAGAATCCTACTATCCTTGCTGTAGGGTTTATAACAATAATGCAAGGCACCATTTTAACCAATAGGCCAGTTCAACCAGTTCTACCATGAGGCTAAACAATGGTGAGTGTAAAAACGGACTCATAAGTCAAGCGCTAGTCatttgagctgtgtgtgtgggtatgctACTACCTGTACTATGAATGGAAAAGCTTACGAAAAACCAAAGCTATTAATTTAAAATCAGTGAAGTGATGGTTTGTTGTGCCACCCTTGACTGTGCCTTCTCTGTAGACACAGAAACATTTGTTGCGAGGAGAGCAGTGCAAACAGTCTCGTTCTCCTCCTTGTCTTGTGATCGATCGTCCTCTCTCATCATCCCCCCTCGCACACAGCTCCTAGCCTGTGCATCTATTGATCTGGCTGCTCTGACATCACATGATTGAGCACTGCTCTGCCGCTCCAGCCCCAGAGGCTCCTGGGAGATTCAGGGATTCCAGGTCAAAGTTCAGGCCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU846587 True 2262 lncRNA 0.43 3 74344903 74347740

Neighbor

gene id symbol gene type direction distance location
LOC118965552 NA coding upstream 65135 74275326 ~ 74279768 (+)
LOC110530563 LOC106569381 coding upstream 97616 74244401 ~ 74247287 (+)
LOC110530564 LOC106569383 coding upstream 114790 74228111 ~ 74230113 (+)
zte38 LOC106569397 coding upstream 354988 73982708 ~ 73991211 (+)
prdx1 nkef coding upstream 363724 73974656 ~ 73981179 (+)
si:dkeyp-66d1.7 LOC106569375 coding downstream 20397 74368137 ~ 74376776 (+)
ftr66 LOC106569374 coding downstream 29107 74376847 ~ 74382998 (+)
ltb4r2b LOC106569372 coding downstream 60645 74408385 ~ 74413205 (+)
sdr39u1 sdr39u1 coding downstream 76707 74424447 ~ 74428142 (+)
parp2 parp2 coding downstream 84004 74431744 ~ 74438581 (+)
G745764 copa non-coding upstream 19002 74322703 ~ 74325901 (+)
G745804 NA non-coding upstream 25215 74319445 ~ 74319688 (+)
G745803 NA non-coding upstream 26688 74318004 ~ 74318215 (+)
G745801 NA non-coding upstream 29267 74315418 ~ 74315636 (+)
G745800 NA non-coding upstream 29545 74314574 ~ 74315358 (+)
G745821 NA non-coding downstream 14699 74362439 ~ 74362681 (+)
G745826 NA non-coding downstream 31266 74379006 ~ 74379661 (+)
G745873 NA non-coding downstream 131660 74479400 ~ 74480069 (+)
G745763 NA non-coding downstream 153731 74501471 ~ 74502888 (+)
G745489 NA other upstream 624253 73719716 ~ 73720650 (+)
G745410 LOC106569417 other upstream 749665 73593637 ~ 73595238 (+)
G745083 NA other upstream 1094407 73249424 ~ 73250496 (+)
G744697 NA other upstream 1476521 72867101 ~ 72868382 (+)
G744696 NA other upstream 1480200 72862256 ~ 72864703 (+)
G746052 NA other downstream 604945 74952685 ~ 74953842 (+)
nedd8 nedd8 other downstream 666904 75014644 ~ 75033896 (+)
G746936 NA other downstream 980032 75327772 ~ 75328195 (+)
LOC110530987 LOC106569478 other downstream 1002468 75151419 ~ 75357954 (+)
G746951 LOC106591969 other downstream 1031762 75379450 ~ 75383243 (+)

Expression


Co-expression Network