G745763


Basic Information

Item Value
gene id G745763
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 74501471 ~ 74502888 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU846535
tgacaaagcaaaaaaagttttttagaacattttgctaatttattaaaaatataaaacattgcaagtattcagaccctttactcagtactttgttgaagcaccttcagcagcaattacagccttgagtcttcttgggtgtgacgctacaagcttggcacacctgtattggggagttgcagatcctctcaagctctgtcaggttggatggggagcatggctgcacagctattttaggtctctccagagacgttcgatcaagttcaagtccgagctctggcggggccactcaaggacattcagagacttgtcccgaagccaatcctgcattgtcttggctgtgtgcttagggtcattgtccttttggaaggtgaacctttgccccagtctgaggtcctgagtgttctggaACAGtgtttcattaaggatctctctgtactttgcgccgtacatctttgccttgatcctgactagtctcccagtccctgctgctgaaaaacattcccacagcatgatgctgccaccaccatgcttcaccgtaggtacGGTGCCAGGTGtcttccagacgtgatgcttggcattcaggccaaagagttcaatcttggtttcagcagaccagagaatcttgtttctcatagtctgagagtctttaggtgcctttaggcaaactacaagcgggatgtcatgtgccttttactgagtggtggcttccatctggccactcttccataaaagcctgatttggtggagtgctgcagagatggttgtccttctggaaggttctcctatctccacagaggaactctagagcactgtcggagtgaccatcgggttcttggtcacctccctgaccaaggtccttctcccccgattgctccgtttggcagggcagccagctgtaggaagagtcttggtggttccatttaagaaagatggaggcAACTGTTTAGAAAGCACTTTCGCTACACCtgccataacatctgctaaatatgtgtatgtgaacaatacaatttgatttcttggggaccttcaatgctgcagaatatttttggtatccttcaccagatctgtgcctcaacacaatcctgtctcggagctctacggacaattccttcgacctcgtggcttggtttttgctctgacatgcaccgtctatggtgggaccttatataggcaggtgtgtgcctttccaaattatgtcaaatcaattgaatttaacacaggtgtactccaagttgtagaaacatgtcaagtatgatcaatggaaacaccattcacctgagcttaattttgattctcatagcaaagggtctgaatacttatgtaaacaaggtatttgatttttgtttttaataaattagcaaaaatgtataaacctgttttcactttgtcattatggggtattctgtgtagatttcTGA

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU846535 True 1418 lncRNA 0.45 1 74501471 74502888

Neighbor

gene id symbol gene type direction distance location
LOC110530582 LOC106569368 coding upstream 349 74480507 ~ 74501122 (+)
parp2 parp2 coding upstream 62890 74431744 ~ 74438581 (+)
sdr39u1 sdr39u1 coding upstream 73329 74424447 ~ 74428142 (+)
ltb4r2b LOC106569372 coding upstream 88266 74408385 ~ 74413205 (+)
ftr66 LOC106569374 coding upstream 118473 74376847 ~ 74382998 (+)
LOC110530584 LOC106569421 coding downstream 27786 74530674 ~ 74534017 (+)
LOC110530591 LOC100196652 coding downstream 194461 74697349 ~ 74712803 (+)
LOC110530590 LOC106569450 coding downstream 210202 74713090 ~ 74717411 (+)
LOC110530985 NA coding downstream 292528 74795416 ~ 74796285 (+)
LOC110530598 LOC106569444 coding downstream 301813 74804701 ~ 74813438 (+)
G745873 NA non-coding upstream 21402 74479400 ~ 74480069 (+)
G745826 NA non-coding upstream 121810 74379006 ~ 74379661 (+)
G745821 NA non-coding upstream 138790 74362439 ~ 74362681 (+)
G745810 NA non-coding upstream 153731 74344903 ~ 74347740 (+)
G745766 NA non-coding downstream 98 74502986 ~ 74503510 (+)
G745880 NA non-coding downstream 1867 74504755 ~ 74505021 (+)
G745884 LOC100136012 non-coding downstream 6528 74509416 ~ 74509726 (+)
G745892 NA non-coding downstream 19304 74522192 ~ 74522413 (+)
G745893 NA non-coding downstream 20076 74522964 ~ 74523164 (+)
G745489 NA other upstream 780821 73719716 ~ 73720650 (+)
G745410 LOC106569417 other upstream 906233 73593637 ~ 73595238 (+)
G745083 NA other upstream 1250975 73249424 ~ 73250496 (+)
G744697 NA other upstream 1633089 72867101 ~ 72868382 (+)
G744696 NA other upstream 1636768 72862256 ~ 72864703 (+)
G746052 NA other downstream 449797 74952685 ~ 74953842 (+)
nedd8 nedd8 other downstream 511756 75014644 ~ 75033896 (+)
G746936 NA other downstream 824884 75327772 ~ 75328195 (+)
LOC110530987 LOC106569478 other downstream 847320 75151419 ~ 75357954 (+)
G746951 LOC106591969 other downstream 876614 75379450 ~ 75383243 (+)

Expression


Co-expression Network