G745884 (LOC100136012)


Basic Information

Item Value
gene id G745884
gene name LOC100136012
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 74509416 ~ 74509726 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU846665
gtgtagggacatcaggggtaaaattgcagacctgcacaaggctggggtgGGCTACAAATCagtaggcaagcagcttggtgagaaggcaacaactgttggcgcaattattagaaaatggaagaagttcaagatgacggtcaatcatcctcggtctggggctccatacaagatctcacctcgtggggcatcaatgatcatgaggaaggtgagggatcagcccagaactacatgggaggacctggtcaatgacctgaagagagctgggaccacagtctcaaagaaaaccattagtaacacaatacgccgtcatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU846665 True 311 lncRNA 0.50 1 74509416 74509726

Neighbor

gene id symbol gene type direction distance location
LOC110530582 LOC106569368 coding upstream 8294 74480507 ~ 74501122 (+)
parp2 parp2 coding upstream 70835 74431744 ~ 74438581 (+)
sdr39u1 sdr39u1 coding upstream 81274 74424447 ~ 74428142 (+)
ltb4r2b LOC106569372 coding upstream 96211 74408385 ~ 74413205 (+)
ftr66 LOC106569374 coding upstream 126418 74376847 ~ 74382998 (+)
LOC110530584 LOC106569421 coding downstream 20948 74530674 ~ 74534017 (+)
LOC110530591 LOC100196652 coding downstream 187623 74697349 ~ 74712803 (+)
LOC110530590 LOC106569450 coding downstream 203364 74713090 ~ 74717411 (+)
LOC110530985 NA coding downstream 285690 74795416 ~ 74796285 (+)
LOC110530598 LOC106569444 coding downstream 294975 74804701 ~ 74813438 (+)
G745880 NA non-coding upstream 4395 74504755 ~ 74505021 (+)
G745766 NA non-coding upstream 5906 74502986 ~ 74503510 (+)
G745763 NA non-coding upstream 6528 74501471 ~ 74502888 (+)
G745873 NA non-coding upstream 29347 74479400 ~ 74480069 (+)
G745892 NA non-coding downstream 12466 74522192 ~ 74522413 (+)
G745893 NA non-coding downstream 13238 74522964 ~ 74523164 (+)
G745898 NA non-coding downstream 19391 74529117 ~ 74529349 (+)
G745899 NA non-coding downstream 19837 74529563 ~ 74529788 (+)
G745760 NA non-coding downstream 33113 74542839 ~ 74549712 (+)
G745489 NA other upstream 788766 73719716 ~ 73720650 (+)
G745410 LOC106569417 other upstream 914178 73593637 ~ 73595238 (+)
G745083 NA other upstream 1258920 73249424 ~ 73250496 (+)
G744697 NA other upstream 1641034 72867101 ~ 72868382 (+)
G744696 NA other upstream 1644713 72862256 ~ 72864703 (+)
G746052 NA other downstream 442959 74952685 ~ 74953842 (+)
nedd8 nedd8 other downstream 504918 75014644 ~ 75033896 (+)
G746936 NA other downstream 818046 75327772 ~ 75328195 (+)
LOC110530987 LOC106569478 other downstream 840482 75151419 ~ 75357954 (+)
G746951 LOC106591969 other downstream 869776 75379450 ~ 75383243 (+)

Expression


Co-expression Network