G745967


Basic Information

Item Value
gene id G745967
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 74780777 ~ 74782673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU846770
ACAACCTTTTAAAACATCCTTACACTCGCTCTTCAAACACCCACGCACTCCCTCACACGGACCCAGTTTTCCTGAATGATCCGAGATTTTAAACACAAGCAATGTAGGGATTTGCAAAACTAGGCATTTATTCACTGAGTACTGTAATACAATCCTGGAGTCTAGGTTTAtgttaataataaaaaaagagaTGATGATATCACCTGTTTCAGTTTGAAAGGTGTCCTCCTTGCTTTCCATGTCAGTTGAAGTCAGTCATTTGTCCTTAGAGATGGAGTGATAGCAACACATTCCTCGTAacatctctcttctctgttctcccaTTCTACAGTATCAGACACCTCCCTTTGAAACAGGCATCTAAAAAGCCATGCCAGAGGACCCACggctctctcgcactctctctcgtTTTTCTCTAAAAATGAAAAGTGCCAGTGAAAGTATTGCATCTGAGATGTTTCAATATTGAAGGTTATTTTGTTGAAGGTCATACCTTGACCATCTTCCAGTGAATACTTTTCAATATAATAGCCTACGTAAaaggagtgtacaaaacattagaaacacatgctcttttcatgacatagcCTTCACTTAGATTCACCTGCTCAGTCTATGATCCATTATTGctgtcacttcaatcagtgtagacgaaaaggaggagacaggataaagaaggatttgtgttcatgatgttttgtacacagtgtaattTAACTTTTGTGAAAGCTTCTAATGCCTAATGATTTTGTAATCTATATTAAAATATGGTTCAGTCCACATACCTTCCACCTTTTCTTAACAACATAATTTATGGTATTTAGCTTGGTACATGGGTGCCACATAGAACGCATATTGATTATTGTATGCATAAAAAAATTGTCTAAACAAACTTGTGAAAGGGAATGGGACCCCATAGCTGTTACACCACAATAATCTAGAACTATCAACTGAATGTGTACTTTTCTAATTCTTTAAGAATATTGTCCTGTAGTTTGGATGTATTTGATCAAAAAAAACTCTGCCTTGGGTCCAAGTTACTTGGGTCTTTCAAATACCCCTAAACTGTGACAAAATTAGGACATACACATCCATTCCTTACTGATTCAAAGTCATAGTTCACAGTATTTCAAGTCCTGAGTGCTGTAAGAATATAGTCTTACAATTATTCATGCTCACACAAGCTCTTTTGTTCATAGTCCAATCCCTCATGAGATCCTGGGAGATGTTCCAGAAAGAAACCTCCCACAAAGTCTCCTGAGGCCCACCCCGAAGGTGTCCCAGCTATAGAAATATAATTTTTATTCTCTGGTCTCGAATGATTCCTCACACCCTCACTATAGAGATTCTGCTGTGGAGCTCAGCCTTGTAGAGGCCAAAGCCTAGGCACACAGGCTGGTTGAAGGAGGTGCTGAAGGTGTGCAAGTGGGTCAGGGTGTTGGAAGGCCCCACCTCTGAGAAGGTGATTGTGCCTATGCCATAATCCAGGGCCACACCCACACGGTTGCCTGACATCCGGCTGGAAAGGCGGGTCTTCCTGCGGTT

Function

NR:

description
E3 ubiquitin/ISG15 ligase TRIM25-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU846770 True 1545 lncRNA 0.41 2 74780777 74782673

Neighbor

gene id symbol gene type direction distance location
LOC110530590 LOC106569450 coding upstream 63366 74713090 ~ 74717411 (+)
LOC110530591 LOC100196652 coding upstream 67974 74697349 ~ 74712803 (+)
LOC110530584 LOC106569421 coding upstream 246760 74530674 ~ 74534017 (+)
LOC110530582 LOC106569368 coding upstream 279655 74480507 ~ 74501122 (+)
parp2 parp2 coding upstream 342196 74431744 ~ 74438581 (+)
LOC110530985 NA coding downstream 12743 74795416 ~ 74796285 (+)
LOC110530598 LOC106569444 coding downstream 22028 74804701 ~ 74813438 (+)
LOC110530599 LOC106569443 coding downstream 39821 74822494 ~ 74843597 (+)
c8h14orf119 cssa14h14orf119 coding downstream 106532 74889205 ~ 74892644 (+)
homeza homez coding downstream 175517 74958190 ~ 74964449 (+)
G745950 NA non-coding upstream 26803 74753288 ~ 74753974 (+)
G745932 NA non-coding upstream 52131 74727769 ~ 74728646 (+)
G745920 NA non-coding upstream 85865 74694712 ~ 74694912 (+)
G745910 NA non-coding upstream 98587 74681895 ~ 74682190 (+)
G745908 NA non-coding upstream 100223 74680337 ~ 74680554 (+)
G745976 NA non-coding downstream 9442 74792115 ~ 74792467 (+)
G745977 NA non-coding downstream 9885 74792558 ~ 74792816 (+)
G746008 NA non-coding downstream 58334 74841007 ~ 74841341 (+)
G745489 NA other upstream 1060127 73719716 ~ 73720650 (+)
G745410 LOC106569417 other upstream 1185539 73593637 ~ 73595238 (+)
G745083 NA other upstream 1530281 73249424 ~ 73250496 (+)
G744697 NA other upstream 1912395 72867101 ~ 72868382 (+)
G744696 NA other upstream 1916074 72862256 ~ 72864703 (+)
G746052 NA other downstream 170012 74952685 ~ 74953842 (+)
nedd8 nedd8 other downstream 231971 75014644 ~ 75033896 (+)
G746936 NA other downstream 545099 75327772 ~ 75328195 (+)
LOC110530987 LOC106569478 other downstream 567535 75151419 ~ 75357954 (+)
G746951 LOC106591969 other downstream 596829 75379450 ~ 75383243 (+)

Expression


Co-expression Network