G746008



Basic Information


Item Value
gene id G746008
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 74841007 ~ 74841341 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU846834
CTAAAGAACGTTGAAAACATATTTCTCTGTCATGAATTGCCCTATTTGGCCATTCGATGATAGCAAATTTCCCAAATAAGTGGTTCTGACTTTTTAAATGGAGAACTAAAACCATCAATGTGAAACAAAGAAATGCTACAATGATACTATTCACTCACTGAATATCAGTTATCCGGCTGAGCTCAAGAGGCCAAGCTAAGAGAACCAGAACGTCTGTCTCCGGCAGGTTTTGTCTTTCAGTGGCTCACTTAGCCTACATCTCATAACCCAGAGCACACCAGCTGAGAAACCACTTCTTTGGAAGAGTAATAGGCCTGTAGGTGTGATGTCAGCAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU846834 True 335 lncRNA 0.41 1 74841007 74841341

Neighbor


gene id symbol gene type direction distance location
LOC110530598 LOC106569444 coding upstream 28438 74804701 ~ 74813438 (+)
LOC110530985 NA coding upstream 44722 74795416 ~ 74796285 (+)
LOC110530590 LOC106569450 coding upstream 123596 74713090 ~ 74717411 (+)
LOC110530591 LOC100196652 coding upstream 128204 74697349 ~ 74712803 (+)
LOC110530584 LOC106569421 coding upstream 306990 74530674 ~ 74534017 (+)
c8h14orf119 cssa14h14orf119 coding downstream 47864 74889205 ~ 74892644 (+)
homeza homez coding downstream 116849 74958190 ~ 74964449 (+)
nedd8 nedd8 coding downstream 190585 75014644 ~ 75033896 (+)
LOC110530986 LOC102210751 coding downstream 243126 75084467 ~ 75085636 (+)
psmb5 LOC106569426 coding downstream 247435 75088776 ~ 75096658 (+)
G745977 NA non-coding upstream 48191 74792558 ~ 74792816 (+)
G745976 NA non-coding upstream 48540 74792115 ~ 74792467 (+)
G745967 NA non-coding upstream 58334 74780777 ~ 74782673 (+)
G745950 NA non-coding upstream 87033 74753288 ~ 74753974 (+)
LOC110530599 LOC106569443 non-coding downstream 610 74822494 ~ 74843597 (+)
G746012 NA non-coding downstream 11517 74852858 ~ 74853979 (+)
G746014 NA non-coding downstream 13368 74854709 ~ 74854939 (+)
G746041 LOC100380853 non-coding downstream 97372 74938713 ~ 74938952 (+)
G746045 NA non-coding downstream 101541 74942882 ~ 74943082 (+)
G745489 NA other upstream 1120357 73719716 ~ 73720650 (+)
G745410 LOC106569417 other upstream 1245769 73593637 ~ 73595238 (+)
G745083 NA other upstream 1590511 73249424 ~ 73250496 (+)
G744697 NA other upstream 1972625 72867101 ~ 72868382 (+)
G744696 NA other upstream 1976304 72862256 ~ 72864703 (+)
G746052 NA other downstream 111344 74952685 ~ 74953842 (+)
G746936 NA other downstream 486431 75327772 ~ 75328195 (+)
LOC110530987 LOC106569478 other downstream 508867 75151419 ~ 75357954 (+)
G746951 LOC106591969 other downstream 538161 75379450 ~ 75383243 (+)

Expression



Co-expression Network