G746012


Basic Information

Item Value
gene id G746012
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 74852858 ~ 74853979 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU846838
GACctttagcactttgtgacatctgctgatgtaaaaagggctttataaatacatttgattgattgattttagctaattagcaactttgcaactacttagctaacccttcccctaaccctttaacctaactcctaaccataactttaaacctaaccttaacccctagtctagctaacgttagccacctagctaacattagccacaacaaattataatttgtaaaatacagtttcataCAAATTGTATCAAAAAATATCAACCAaaatgtaattcataacatattatgCAAATGGatagacatccacaaattaatacataccttACCAAACGTAAAATGTaataatttgagtgtcccggattttcatttactatgttatgtttATCCCTGAGTCCAGGCTGAAAATTGAAGGTCCTACTCATGACCATTGCTGTAAAACAGTGGCGGTCAGTGACGTTTAATTCgtatgtcattcatattccattcacccagctcaatgtaacatcgataggtttaggatactacatgatactcaaattttccctacaCCCATCATGAGGTTTCTACATCCTATCTTATGAATGAAAGtatacaacgtaggtgcacaggtccaGAGGAAAattaggtgacagacagtgacacattcaatactgccttgcactctcttgcctgcatctagctgatctagagtgtaatcattagtccaacagttgcaaacaagagtttctattggacaaattcaggtatgtttatccccgtttcggtctgtttgcttctgtttaagaaatgttttttggcagaatgaatacaccccagatcaTACGCaagcacagttcactttcatagcagccacatacaaacagcatgatcatttgcTCATTGAAAAAATTCCTTCTCGAATCTACGTGCTCTCCTCCTCATACACCTTTTCCCTTTGCtagtggacttcagtgcacaacacatcagctgtctgtgaccaggcaaaaaaacatTTCTAAGCCAAACCTTTATATCATAACCACTaacctctacacacagcctacatcgttgtcaccataatAGCTAAtaatcaacatagctactagaactaacgcattagtaaacctgctacaatcatgcagtac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU846838 True 1122 lncRNA 0.37 1 74852858 74853979

Neighbor

gene id symbol gene type direction distance location
LOC110530599 LOC106569443 coding upstream 9261 74822494 ~ 74843597 (+)
LOC110530598 LOC106569444 coding upstream 40289 74804701 ~ 74813438 (+)
LOC110530985 NA coding upstream 56573 74795416 ~ 74796285 (+)
LOC110530590 LOC106569450 coding upstream 135447 74713090 ~ 74717411 (+)
LOC110530591 LOC100196652 coding upstream 140055 74697349 ~ 74712803 (+)
c8h14orf119 cssa14h14orf119 coding downstream 35226 74889205 ~ 74892644 (+)
homeza homez coding downstream 104211 74958190 ~ 74964449 (+)
nedd8 nedd8 coding downstream 177947 75014644 ~ 75033896 (+)
LOC110530986 LOC102210751 coding downstream 230488 75084467 ~ 75085636 (+)
psmb5 LOC106569426 coding downstream 234797 75088776 ~ 75096658 (+)
G746008 NA non-coding upstream 11517 74841007 ~ 74841341 (+)
G745977 NA non-coding upstream 60042 74792558 ~ 74792816 (+)
G745976 NA non-coding upstream 60391 74792115 ~ 74792467 (+)
G746014 NA non-coding downstream 730 74854709 ~ 74854939 (+)
G746041 LOC100380853 non-coding downstream 84734 74938713 ~ 74938952 (+)
G746045 NA non-coding downstream 88903 74942882 ~ 74943082 (+)
G746048 NA non-coding downstream 90929 74944908 ~ 74945125 (+)
G746051 NA non-coding downstream 97328 74951307 ~ 74951584 (+)
G745489 NA other upstream 1132208 73719716 ~ 73720650 (+)
G745410 LOC106569417 other upstream 1257620 73593637 ~ 73595238 (+)
G745083 NA other upstream 1602362 73249424 ~ 73250496 (+)
G744697 NA other upstream 1984476 72867101 ~ 72868382 (+)
G744696 NA other upstream 1988155 72862256 ~ 72864703 (+)
G746052 NA other downstream 98706 74952685 ~ 74953842 (+)
G746936 NA other downstream 473793 75327772 ~ 75328195 (+)
LOC110530987 LOC106569478 other downstream 496229 75151419 ~ 75357954 (+)
G746951 LOC106591969 other downstream 525523 75379450 ~ 75383243 (+)

Expression


Co-expression Network