XLOC_026425


Basic Information

Item Value
gene id XLOC_026425
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 29994895 ~ 30004929 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053046
TGAGAATCGTCTCAGATGACGCAAAGACTGTGACTTCGCCTTGTTTCTTTCTCTCTTGCGCTCTTGGTCTCGTTCTCTctctcccccctctctctctatctcaATCACGCTccatctctctttctcactcCCTGTCCATTCTTTCCACATGTCTCTTTCCTAATGCCTCAATCTTGTTGGATGGGAGACGGCTCTAAAGCACAGGTTTCACAGAGGATTATGTATGTGCAATTGAAACTTGGCAAATGACTTCCctccccctccaaaaaaaaaaaaaaacatttcagccaCGCTGCCAATCCGTCTTTATGTCTGAGCAGCAACTGTTGTTTTAGTTTAAATCTGAGATGAACAGCAAACAGATGAACAGGACAGGGAACAtccagagaaagaaaaagaaatggaGGTCAAAGAGTCAGAACCACACCGCACCGAAAAACGGTAAGAACACAATGGGTAAAAAGGCCACAACGGCAAACTTGGGTGAGTATTTTTCTCATCAAGCTATTTTAGGACTAAAAAACTGTTCACGGTGAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053046 True 537 lncRNA 0.44 2 29994895 30004929

Neighbor

gene id symbol gene type direction distance location
XLOC_026424 hsd17b14 coding downstream 17400 29969143 ~ 29977495 (-)
XLOC_026423 bcat2 coding downstream 26840 29949984 ~ 29968055 (-)
XLOC_026422 grna coding downstream 53538 29914427 ~ 29941357 (-)
XLOC_026421 RUNDC1 coding downstream 84348 29902221 ~ 29910547 (-)
XLOC_026420 rpl27 coding downstream 95665 29893966 ~ 29899230 (-)
XLOC_026426 NA coding upstream 14907 30019836 ~ 30023485 (-)
XLOC_026427 NA coding upstream 31768 30036697 ~ 30039149 (-)
XLOC_026428 ppfia3 coding upstream 39082 30044011 ~ 30123113 (-)
XLOC_026429 nucb1 coding upstream 135651 30140580 ~ 30153242 (-)
XLOC_026430 ccndx coding upstream 149037 30153966 ~ 30158395 (-)
XLOC_026418 NA non-coding downstream 126163 29868635 ~ 29868732 (-)
XLOC_026417 BX901883.1 non-coding downstream 127355 29867404 ~ 29867540 (-)
XLOC_026415 NA non-coding downstream 131289 29835165 ~ 29863606 (-)
XLOC_026414 BX901883.6 non-coding downstream 224637 29770142 ~ 29770258 (-)
XLOC_026413 BX901883.4 non-coding downstream 277750 29713211 ~ 29717145 (-)
XLOC_026432 NA non-coding upstream 194107 30199036 ~ 30201831 (-)
XLOC_026439 NA non-coding upstream 689948 30694877 ~ 30696290 (-)
XLOC_026441 BX682556.2 non-coding upstream 795612 30800541 ~ 30800658 (-)

Expression


Co-expression Network