G746080 (LOC106569427)


Basic Information

Item Value
gene id G746080
gene name LOC106569427
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 75070646 ~ 75072366 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU846920
GCTAGTAGTTGTCTTTATTGACAATATGGATCCGACAAAAAACATAACAAAAAGAAATGAACACCTGACAAACATATGACCTGAACAGCCCatctcctacacactgctgtatCGGAGTTGTAACCAGTTTAAGTGTGTTGAGTTACAATTTAGAGCCATTTCATCGATCCGTTATAGTATGGAATAGgttttttgaccaatcacatcagatatttttcatagatgatctgattggtcaaaagaacaattagtgaaaaaaatataaaaattcaGCTGCCTGTCTGAATACTGCCATTGGGGGTATCTTGACTGCTGGCAAAATAAGTAACTTAAACTCAATAGGTATGGGAATGTATGTGGATGATAGTCCATGCCTGAAACTGACTCCTAACTATACTGTAAAGTAACAGCCTCAAATCGGTCCCATCTAAACCATTGATTGGGTTCTTATTCCCAGCTCTAAAGCCTCACTGTGACCCTGGTCTGTAGGTTTGTAAAGCCTCACTGTGACCCTGGTCTGTAGGTTTGTAAAGCCTCACTGTGACCCTGGTCTGTAGGTTTCTAAACCTTCAATTTGGCCCTGGTCTATAGGTTTCTAAATCTTCAATTTGGCCCTGGTCTGTAGGTTTCTAAACCCTCACTGTGACCCTGGTCTGTAGGTTTCATGGTATGAGCAGGCTCATGATTACAGGTGAATAGGTAAAATGCTAGACCTTTTGAGCAAGACTACCTCAACTTCATTTGCAACTAAGTGCCTGTTTAATTGCgtctgtatgcatgtgtgtgtatgtgggtgtgagATCTTCACAGGCCGATGGTGTAGGATCGTCCTGCTGGGTTGTGGATAGCGGAGCATGAGGGCTCTGTCACGGCCCATTCGTACCACACCTTCTTCCCATTGTTACACCTCCAGAACCTCACCACGACGTCATCATCCTTCGTCACAGGGATCGGTTGCTGCAGGGTGAATGAAGGTGAAGCAGGCCTTGGGCTCAGCCAGCTGGTGGAAGTTGTGGAGTCGGACTACGTAAGGGGTCTCAAAGTGGCACTCAGGGTCCTTGTCCCGCTCCCTGCACCCCCGGACCTCGTTATACAGcttggaggaagagaggggggccAGGAAGGAGGTGTAGGAACAGGGGATGCTCACCCCGCCATCTGAGAGGAACAAGAGAATGGGAACACGTTTAA

Function

NR:

description
arginine N-methyltransferase 5, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU846920 True 1191 lncRNA 0.46 3 75070646 75072366

Neighbor

gene id symbol gene type direction distance location
nedd8 nedd8 coding upstream 36827 75014644 ~ 75033896 (+)
homeza homez coding upstream 106197 74958190 ~ 74964449 (+)
c8h14orf119 cssa14h14orf119 coding upstream 178002 74889205 ~ 74892644 (+)
LOC110530599 LOC106569443 coding upstream 227049 74822494 ~ 74843597 (+)
LOC110530598 LOC106569444 coding upstream 258077 74804701 ~ 74813438 (+)
LOC110530986 LOC102210751 coding downstream 12101 75084467 ~ 75085636 (+)
psmb5 LOC106569426 coding downstream 16410 75088776 ~ 75096658 (+)
LOC110530987 LOC106569478 coding downstream 79053 75151419 ~ 75357954 (+)
LOC110530620 LOC106569477 coding downstream 316261 75388627 ~ 75444838 (+)
LOC110530623 LOC106569476 coding downstream 418469 75490835 ~ 75522652 (+)
G746089 LOC106569429 non-coding upstream 22329 75047164 ~ 75048317 (+)
G746064 NA non-coding upstream 98560 74971869 ~ 74972086 (+)
G746060 NA non-coding upstream 101320 74969072 ~ 74969326 (+)
G746058 NA non-coding upstream 103677 74966425 ~ 74966969 (+)
G746052 NA non-coding upstream 116804 74952685 ~ 74953842 (+)
G746830 NA non-coding downstream 72627 75144993 ~ 75145223 (+)
G746833 NA non-coding downstream 77844 75150210 ~ 75150519 (+)
G746905 NA non-coding downstream 187161 75259527 ~ 75259816 (+)
G746906 NA non-coding downstream 188319 75260685 ~ 75260950 (+)
G745489 NA other upstream 1349996 73719716 ~ 73720650 (+)
G745410 LOC106569417 other upstream 1475408 73593637 ~ 73595238 (+)
G745083 NA other upstream 1820150 73249424 ~ 73250496 (+)
G746936 NA other downstream 255406 75327772 ~ 75328195 (+)
G746951 LOC106591969 other downstream 307136 75379450 ~ 75383243 (+)
G747680 NA other downstream 1043327 76115693 ~ 76115986 (+)
G747987 cah12 other downstream 1167584 76239950 ~ 76394329 (+)

Expression


Co-expression Network