G746951 (LOC106591969)


Basic Information

Item Value
gene id G746951
gene name LOC106591969
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 75379450 ~ 75383243 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU847963
tattcctctctcctacagcgtccatcacaatAGGCCTTATGCACATTCCATGATCGAAAGTTCTAAACACAATTCCTATCGGTTTGGCAATTTCCGGTCAGTCTAGTTGTTATCGACGATATAACGTTACTACCACTATGTCGCAGTTTTTTTACTAGGTGTCTTCGGGACTTGCCTCAAATTAATATTGTACATCGAATTGTTACATCAGCCTCCGAGACTCCAGCTAGCAAGAATGAAAAGGGGTTCAATATGTATATAGGAAGCTACATAGACAACTATGAAGGAAGCAGTGGCAAATTGCAAGAAAACCACCAACTCTTTAATGGCTGCGATGAGAGGGCGGCAAACCAAGATGGATGAAATTCATCCAGTCTCTTTGAGACATTGGCTGATGACTGCAAGAAAAAGGATTGCTTCTCTGAAAGAGCAAAGGAAATAGAAGAGCTGGTGTTCTGCCAACGACCAGAGCGGATTTCTTGCGTTATGCCACCACCCTGCCCCTTGACCCCCAACACGTCCAACTACAACCTCGTTCTGACAGACGACAGTTCAGTCCAACACTGCAAGAAGCCCCAGCCCaccctgacccccaggtcctgtgtAAAGAGGAAGAAACCCTCTATGTCCTGGCCTTTATTGTTGTTTGCTGCCCCAGCATCATCAGAAAGAAGACCCTTTCAACGATCGCTTTGAACGTAACAGCAATGTCTGGTGCTTACGACCGACTTTGATCTACAGTTAGGTCCACCATGGCCCAGCAGAGAATCATACGCAATGTGTCCTAGAGGTTAGTGAAGCGGACCAGCAACTGAGGGAAAACACATCTGGTTTGGATTGGGCCTGCAACCGGAGTGCATCACTGTCCTCACTGTCCTAGATGCCATCACCTGTTGTACCCTTGACCAAGGCATTTGCTCAACAAGCACTATAGTATGGCTGTCTGGAATAAAGCAGAAGACAAGATTCCATTGGACTCCAGTGTACATTGGACTGATAATAATGTAATCTTCTTCGTCATAGAAATGTCCCATGGAGACTAAACTGCCCATGGTCAAGAAACATGGTGATATGAAGGTTGGTGTGTTTGTGGACTACCCAGCTGGTCTGATCTCCTACAAGGCCCAGGTTCCAGACAGCACCATGGTCCACCTCTACACGTTCGAGGCCACCTTCACACAACCCCTCTATGCAGGGTTTAGAGTGAGCTCTCTGAAACTGGGTAGCCTCGTCCCCACAGTGCCTTCCAGGTGAAACATTGATGACATCTTGCCCTTTCCTTGTGTGCCACAAAAGATGATGAAAGGCTTGTGTACCCAAAGACCTAACAGCAAATGGCTTTACAAGTGTGTTTATCCTAGTGTGATATATCAATATTCTCTGAGAGCTCAGCGTTTTTCTTTTGCTCATCAAGCCCAGTATGTGTTATTCCTGTGCTAGTTTTAGAGTCTCTTGTGTTCTGCTAAGTGGCCTCTTGTTCTTTTTGTTGCTGAATATTTAGATGTCCTGTGACCTACCGGTATGCTCTCTTGTTGTTCAAGATGCACTACCTTAACATTGAGGGTTTTATTATGCTGTTTCTTTCTTATTGTGAAAGCAATAACTGTCGCTAGAATTGGAACTTGACTGGGT
>TU847964
ATCGAAAGTTCTAAACACAATTCCTATCGGTTTGGCAATTTCCGGTCAGTCTAGTTGTTATCGACGATATAACGTTACTACCACTATGTCGCAGTTTTTTTACTAGGTGTCTTCGGGACTTGCCTCAAATTAATATTGTACATCGAATTGTTACATCAGCCTCCGAGACTCCAGCTAGCAAGAATGAAAAGGGGTTCAATATGTATATAGGAAGCTACATAGACAACTATGAAGGAAGTGTTCTGTGTATGCAAACCATGGAGATGAAGAGGGGGCTAGCCATGGAGCCAGTGGCTGTACAGGAGTACTGCACACTGAAGAATGTTAACTTCTTTCCGTGTGGCTTCGTAGTGCACCCAGATGCTCCGTGGTTAGGATCCTCTCCAGATGGAATCATATTTGATCCCAGTGTGAGACCACACTTTGGACTCTTAGAGGTCAAGTGCCCAAATGTATCAAGTTATGTTGACTGCCCTTACCTGAAGATACAGAATGGAGAGCTGAAGTTGAAGAGATCTCATGCTTACTACTAGCAGGTGCACCTCATAGTCACCTCAAGttcttgggagtatggctagacgGAAGCAGTGGCAAATTGCAAGAAAACCACCAACTCTTTAATGGCTGCGATGAGAGGGCGGCAAACCAAGATGGATGAAATTCATCCAGTCTCTTTGAGACATTGGCTGATGACTGCAAGAAAAAGGATTGCTTCTCTGAAAGAGCAAAGGAAATAGAAGAGCTGGTGTTCTGCCAACGACCAGAGCGGATTTCTTGCGTTATGCCACCACCCTGCCCCTTGACCCCCAACACGTCCAACTACAACCTCGTTCTGACAGACGACAGTTCAGTCCAACACTGCAAGAAGCCCCAGCCCaccctgacccccaggtcctgtgtAAAGAGGAAGAAACCCTCTATGTCCTGGCCTTTATTGTTGTTTGCTGCCCCAGCATCATCAGAAAGAAGACCCTTTCAACGATCGCTTTGAACGTAACAGCAATGTCTGGTGCTTACGACCGACTTTGATCTACAGTTAGGTCCACCATGGCCCAGCAGAGAATCATACGCAATGTGTCCTAGAGGTTAGTGAAGCGGACCAGCAACTGAGGGAAAACACATCTGGTTTGGATTGGGCCTGCAACCGGAGTGCATCACTGTCCTCACTGTCCTAGATGCCATCACCTGTTGTACCCTTGACCAAGGCATTTGCTCAACAAGCACTATAGTATGGCTGTCTGGAATAAAGCAGAAGACAAGATTCCATTGGACTCCAGTGTACATTGGACTGATAATAATGTAATCTTCTTCGTCATAGAAATGTCCCATGGAGACTAAACTGCCCATGGTCAAGAAACATGGTGATATGAAGGTTGGTGTGTTTGTGGACTACCCAGCTGGTCTGATCTCCTACAAGGCCCAGGTTCCAGACAGCACCATGGTCCACCTCTACACGTTCGAGGCCACCTTCACACAACCCCTCTATGCAGGGTTTAGAGTGAGCTCTCTGAAACTGGGTAGCCTCGTCCCCACAGTGCCTTCCAGGTGAAACATTGATGACATCTTGCCCTTTCCTTGTGTGCCACAAAAGATGATGAAAGGCTTGTGTACCCAAAGACCTAACAGCAAATGGCTTTACAAGTGTGTTTATCCTAGTGTGATATATCAATATTCTCTGAGAGCTCAGCGTTTTTCTTTTGCTCATCAAGCCCAGTATGTGTTATTCCTGTGCTAGTTTTAGAGTCTCTTGTGTTCTGCTAAGTGGCCTCTTGTTCTTTTTGTTGCTGAATATTTAGATGTCCTGTGACCTACCGGTATGCTCTCTTGTTGTTCAAGATGCACTACCTTAACATTGAGGGTTTTATTATGCTGTTTCTTTCTTATTGTGAAAGCAATAACTGTCGCTAGAATTGGAACTTGACTGGGT
>TU847968
ATCGAAAGTTCTAAACACAATTCCTATCGGTTTGGCAATTTCCGGTCAGTCTAGTTGTTATCGACGATATAACGTTACTACCACTATGTCGCAGTTTTTTTACTAGGTGTCTTCGGGACTTGCCTCAAATTAATATTGTACATCGAATTGTTACATCAGCCTCCGAGACTCCAGCTAGCAAGAATGAAAAGGGGTTCAATATGTATATAGGAAGCTACATAGACAACTATGAAGGAAGCAGTGGCAAATTGCAAGAAAACCACCAACTCTTTAATGGCTGCGATGAGAGGGCGGCAAACCAAGATGGATGAAATTCATCCAGTCTCTTTGAGACATTGGCTGATGACTGCAAGAAAAAGGATTGCTTCTCTGAAAGAGCAAAGGAAATAGAAGAGCTGGTGTTCTGCCAACGACCAGAGCGGATTTCTTGCGTTATGCCACCACCCTGCCCCTTGACCCCCAACACGTCCAACTACAACCTCGTTCTGACAGACGACAGTTCAGTCCAACACTGCAAGAAGCCCCAGCCCaccctgacccccaggtcctgtgtAAAGAGGAAGAAACCCTCTATGTCCTGGCCTTTATTGTTGTTTGCTGCCCCAGCATCATCAGAAAGAAGACCCTTTCAACGATCGCTTTGAACGTAACAGCAATGTCTGGTGCTTACGACCGACTTTGATCTACAGTTAGGTCCACCATGGCCCAGCAGAGAATCATACGCAATGTGTCCTAGAGGTTAGTGAAGCGGACCAGCAACTGAGGGAAAACACATCTGGTTTGGATTGGGCCTGCAACCGGAGTGCATCACTGTCCTCACTGTCCTAGATGCCATCACCTGTTGTACCCTTGACCAAGGCATTTGCTCAACAAGCACTATAGTATGGCTGTCTGGAATAAAGCAGAAGACAAGATTCCATTGGACTCCAGTGTACATTGGACTGATAATAATGTAATCTTCTTCGTCATAGAAATGTCCCATGGAGACTAAACTGCCCATGGTCAAGAAACATGGTGATATGAAGGTTGGTGTGTTTGTGGACTACCCAGCTGGTCTGATCTCCTACAAGGCCCAGGTTCCAGACAGCACCATGGTCCACCTCTACACGTTCGAGGCCACCTTCACACAACCCCTCTATGCAGGGTTTAGAGTGAGCTCTCTGAAACTGGGTAGCCTCGTCCCCACAGTGCCTTCCAGGTGAAACATTGATGACATCTTGCCCTTTCCTTGTGTGCCACAAAAGATGATGAAAGGCTTGTGTACCCAAAGACCTAACAGCAAATGGCTTTACAAGTGTGTTTATCCTAGTGTGATATATCAATATTCTCTGAGAGCTCAGCGTTTTTCTTTTGCTCATCAAGCCCAGTATGTGTTATTCCTGTGCTAGTTTTAGAGTCTCTTGTGTTCTGCTAAGTGGCCTCTTGTTCTTTTTGTTGCTGAATATTTAGATGTCCTGTGACCTACCGGTATGCTCTCTTGTTGTTCAAGATGCACTACCTTAACATTGAGGGTTTTATTATGCTGTTTCTTTCTTATTGTGAAAGCAATAACTGTCGCTAGAATTGGAACTTGACTGGGT
>TU847965
tgatGCGTGTTCCtccattttctgtgtgtgtgtgtcataaaaGGAAGCAGTGGCAAATTGCAAGAAAACCACCAACTCTTTAATGGCTGCGATGAGAGGGCGGCAAACCAAGATGGATGAAATTCATCCAGTCTCTTTGAGACATTGGCTGATGACTGCAAGAAAAAGGATTGCTTCTCTGAAAGAGCAAAGGAAATAGAAGAGCTGGTGTTCTGCCAACGACCAGAGCGGATTTCTTGCGTTATGCCACCACCCTGCCCCTTGACCCCCAACACGTCCAACTACAACCTCGTTCTGACAGACGACAGTTCAGTCCAACACTGCAAGAAGCCCCAGCCCaccctgacccccaggtcctgtgtAAAGAGGAAGAAACCCTCTATGTCCTGGCCTTTATTGTTGTTTGCTGCCCCAGCATCATCAGAAAGAAGACCCTTTCAACGATCGCTTTGAACGTAACAGCAATGTCTGGTGCTTACGACCGACTTTGATCTACAGTTAGGTCCACCATGGCCCAGCAGAGAATCATACGCAATGTGTCCTAGAGGTTAGTGAAGCGGACCAGCAACTGAGGGAAAACACATCTGGTTTGGATTGGGCCTGCAACCGGAGTGCATCACTGTCCTCACTGTCCTAGATGCCATCACCTGTTGTACCCTTGACCAAGGCATTTGCTCAACAAGCACTATAGTATGGCTGTCTGGAATAAAGCAGAAGACAAGATTCCATTGGACTCCAGTGTACATTGGACTGATAATAATGTAATCTTCTTCGTCATAGAAATGTCCCATGGAGACTAAACTGCCCATGGTCAAGAAACATGGTGATATGAAGGTTGGTGTGTTTGTGGACTACCCAGCTGGTCTGATCTCCTACAAGGCCCAGGTTCCAGACAGCACCATGGTCCACCTCTACACGTTCGAGGCCACCTTCACACAACCCCTCTATGCAGGGTTTAGAGTGAGCTCTCTGAAACTGGGTAGCCTCGTCCCCACAGTGCCTTCCAGGTGAAACATTGATGACATCTTGCCCTTTCCTTGTGTGCCACAAAAGATGATGAAAGGCTTGTGTACCCAAAGACCTAACAGCAAATGGCTTTACAAGTGTGTTTATCCTAGTGTGATATATCAATATTCTCTGAGAGCTCAGCGTTTTTCTTTTGCTCATCAAGCCCAGTATGTGTTATTCCTGTGCTAGTTTTAGAGTCTCTTGTGTTCTGCTAAGTGGCCTCTTGTTCTTTTTGTTGCTGAATATTTAGATGTCCTGTGACCTACCGGTATGCTCTCTTGTTGTTCAAGATGCACTACCTTAACATTGAGGGTTTTATTATGCTGTTTCTTTCTTATTGTGAAAGCAATAACTGTCGCTAGAATTGGAACTTGACTGGGTGAATAAAAGCTTTCTGTAACTTTTCTGTTATTAATTGATTAATGTACAAATCTGAGTTTCTTCCGAGCCTTTTATAtttgaatcatttagcagacgctcttatccagagcgactt
>TU847966
tgatGCGTGTTCCtccattttctgtgtgtgtgtgtcataaaaGGAAGCAGTGGCAAATTGCAAGAAAACCACCAACTCTTTAATGGCTGCGATGAGAGGGCGGCAAACCAAGATGGATGAAATTCATCCAGTCTCTTTGAGACATTGGCTGATGACTGCAAGAAAAAGGATTGCTTCTCTGAAAGAGCAAAGGAAATAGAAGAGCTGGTGTTCTGCCAACGACCAGAGCGGATTTCTTGCGTTATGCCACCACCCTGCCCCTTGACCCCCAACACGTCCAACTACAACCTCGTTCTGACAGACGACAGTTCAGTCCAACACTGCAAGAAGCCCCAGCCCaccctgacccccaggtcctgtgtAAAGAGGAAGAAACCCTCTATGTCCTGGCCTTTATTGTTGTTTGCTGCCCCAGCATCATCAGAAAGAAGACCCTTTCAACGATCGCTTTGAACGTAACAGCAATGTCTGGTGCTTACGACCGACTTTGATCTACAGTTAGGTCCACCATGGCCCAGCAGAGAATCATACGCAATGTGTCCTAGAGGTTAGTGAAGCGGACCAGCAACTGAGGGAAAACACATCTGGTTTGGATTGGGCCTGCAACCGGAGTGCATCACTGTCCTCACTGTCCTAGATGCCATCACCTGTTGTACCCTTGACCAAGGCATTTGCTCAACAAGCACTATAGTATGGCTGTCTGGAATAAAGCAGAAGACAAGATTCCATTGGACTCCAGTGTACATTGGACTGATAATAATGTAATCTTCTTCGTCATAGAAATGTCCCATGGAGACTAAACTGCCCATGGTCAAGAAACATGGTGATATGAAGGTTGGTGTGTTTGTGGACTACCCAGCTGGTCTGATCTCCTACAAGGCCCAGGTTCCAGACAGCACCATGGTCCACCTCTACACGTTCGAGGCCACCTTCACACAACCCCTCTATGCAGGGTTTAGAGTGAGCTCTCTGAAACTGGGTAGCCTCGTCCCCACAGTGCCTTCCAGGTGAAACATTGATGACATCTTGCCCTTTCCTTGTGTGCCACAAAAGATGATGAAAGGCTTGTGTACCCAAAGACCTAACAGCAAATGGCTTTACAAGTGTGTTTATCCTAGTGTGATATATCAATATTCTCTGAGAGCTCAGCGTTTTTCTTTTGCTCATCAAGCCCAGTATGTGTTATTCCTGTGCTAGTTTTAGAGTCTCTTGTGTTCTGCTAAGTGGCCTCTTGTTCTTTTTGTTGCTGAATATTTAGATGTCCTGTGACCTACCGGTATGCTCTCTTGTTGTTCAAGATGCACTACCTTAACATTGAGGGTTTTATTATGCTGTTTCTTTCTTATTGTGAAAGCAATAACTGTCGCTAGAATTGGAACTTGACTGGGT

Function

NR:

description
PREDICTED: stonustoxin subunit beta-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU847963 False 1632 lncRNA 0.45 4 75379450 75383128
TU847964 False 1927 TUCP 0.46 5 75379502 75383128
TU847968 False 1580 lncRNA 0.45 4 75379502 75383128
TU847965 False 1504 lncRNA 0.45 3 75381368 75383243
TU847966 True 1389 lncRNA 0.46 3 75381368 75383128

Neighbor

gene id symbol gene type direction distance location
LOC110530987 LOC106569478 coding upstream 21496 75151419 ~ 75357954 (+)
psmb5 LOC106569426 coding upstream 282792 75088776 ~ 75096658 (+)
LOC110530986 LOC102210751 coding upstream 293814 75084467 ~ 75085636 (+)
nedd8 nedd8 coding upstream 345631 75014644 ~ 75033896 (+)
homeza homez coding upstream 415001 74958190 ~ 74964449 (+)
LOC110530620 LOC106569477 coding downstream 5384 75388627 ~ 75444838 (+)
LOC110530623 LOC106569476 coding downstream 107592 75490835 ~ 75522652 (+)
tgm1l1 tgm1 coding downstream 161681 75544924 ~ 75566032 (+)
LOC110530628 LOC106569474 coding downstream 212447 75595690 ~ 75609631 (+)
LOC110530629 LOC106569473 coding downstream 230697 75613940 ~ 75618260 (+)
G746836 NA non-coding upstream 11221 75363750 ~ 75368229 (+)
G746840 NA non-coding upstream 15877 75362841 ~ 75363573 (+)
G746839 NA non-coding upstream 17260 75360221 ~ 75362190 (+)
G746835 NA non-coding upstream 19683 75358584 ~ 75359767 (+)
G746938 NA non-coding upstream 35950 75343104 ~ 75343500 (+)
G746993 NA non-coding downstream 81147 75464390 ~ 75464612 (+)
G746995 NA non-coding downstream 86668 75469911 ~ 75470111 (+)
G747035 NA non-coding downstream 156012 75539255 ~ 75543094 (+)
G747038 NA non-coding downstream 159724 75542967 ~ 75543486 (+)
G747065 NA non-coding downstream 222132 75605375 ~ 75607233 (+)
G746936 NA other upstream 51255 75327772 ~ 75328195 (+)
G746052 NA other upstream 425796 74952685 ~ 74953842 (+)
G745489 NA other upstream 1658800 73719716 ~ 73720650 (+)
G747680 NA other downstream 732450 76115693 ~ 76115986 (+)
G747987 cah12 other downstream 856707 76239950 ~ 76394329 (+)
LOC110530655 LOC106569480 other downstream 1068327 76451222 ~ 76453376 (+)
G748432 NA other downstream 1323487 76706730 ~ 76708278 (+)
G748905 NA other downstream 1767420 77150663 ~ 77177349 (+)

Expression


Co-expression Network