G747035


Basic Information

Item Value
gene id G747035
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 75539255 ~ 75543094 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU848064
tcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctgggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtggggtggccagtcctcttctggctgtgccgggtggagattataacagaacatggccaagatgttcaaatgttcataaaagatcagcatggtccaataataataaggcagaacagttgaaactggagcagcagcacggccatgtggactggggacagcaaggagtcattatatcaggtagtcctgaggcatggtcctagggcccaggtcctccgagagagagaaagaaagagagaattagag
>TU848065
tcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacgatggctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtggggtggccagtcctcttctggctgtgccgggtggagattataacagaacatgg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU848064 False 394 lncRNA 0.49 2 75539255 75543094
TU848065 True 207 lncRNA 0.49 2 75539255 75542907

Neighbor

gene id symbol gene type direction distance location
LOC110530623 LOC106569476 coding upstream 16603 75490835 ~ 75522652 (+)
LOC110530620 LOC106569477 coding upstream 94417 75388627 ~ 75444838 (+)
LOC110530987 LOC106569478 coding upstream 181301 75151419 ~ 75357954 (+)
psmb5 LOC106569426 coding upstream 442597 75088776 ~ 75096658 (+)
LOC110530986 LOC102210751 coding upstream 453619 75084467 ~ 75085636 (+)
tgm1l1 tgm1 coding downstream 1830 75544924 ~ 75566032 (+)
LOC110530628 LOC106569474 coding downstream 52596 75595690 ~ 75609631 (+)
LOC110530629 LOC106569473 coding downstream 70846 75613940 ~ 75618260 (+)
LOC110530631 catip coding downstream 98160 75641254 ~ 75645294 (+)
trnae-cuc-7 NA coding downstream 118355 75661449 ~ 75661520 (+)
G746995 NA non-coding upstream 69144 75469911 ~ 75470111 (+)
G746993 NA non-coding upstream 74643 75464390 ~ 75464612 (+)
G746951 LOC106591969 non-coding upstream 156012 75379450 ~ 75383243 (+)
G746836 NA non-coding upstream 171026 75363750 ~ 75368229 (+)
G746840 NA non-coding upstream 175682 75362841 ~ 75363573 (+)
G747065 NA non-coding downstream 62281 75605375 ~ 75607233 (+)
G747098 NA non-coding downstream 127698 75670792 ~ 75671187 (+)
G747118 LOC106569490 non-coding downstream 145271 75688365 ~ 75697197 (+)
G747508 NA non-coding downstream 226546 75769640 ~ 75770618 (+)
G747516 NA non-coding downstream 239183 75782277 ~ 75782622 (+)
G746936 NA other upstream 211060 75327772 ~ 75328195 (+)
nedd8 nedd8 other upstream 505359 75014644 ~ 75033896 (+)
G746052 NA other upstream 585601 74952685 ~ 74953842 (+)
G747680 NA other downstream 572599 76115693 ~ 76115986 (+)
G747987 cah12 other downstream 696856 76239950 ~ 76394329 (+)
LOC110530655 LOC106569480 other downstream 908476 76451222 ~ 76453376 (+)
G748432 NA other downstream 1163636 76706730 ~ 76708278 (+)
G748905 NA other downstream 1607569 77150663 ~ 77177349 (+)

Expression


Co-expression Network